RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 TOLLIPQ9H0E2 274 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 ZNF160Q9HCG1 818 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 C1orf123Q9NWV4 160 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 A0A0U1RQV5 110 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 IFNA2P01563 188 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 HPNP05981 417 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 HOXB5P09067 269 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 RAB5AP20339 215 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 SFTPDP35247 375 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 DVL1P1P54792 670 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-219ENST00000608720 S100A10P60903 97 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 BEND4Q6ZU67 534 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 SLC16A14Q7RTX9 510 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 OR51F2Q8NH61 342 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 PP6455Q8WZ26 134 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 LYZL4Q96KX0 146 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 S100A13Q99584 98 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 HRH4Q9H3N8 390 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 TAF9BQ9HBM6 251 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 V9GYS6 101 aa12.86□□□□□ -0.35
CTCFL-219ENST00000608720 STMND1H3BQB6 276 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 RAMP1O60894 148 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 DHRS3O75911 302 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 KLK3P07288 261 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-219ENST00000608720 MSR1P21757 451 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 RBMXP38159 391 aaKnown RBP12.85□□□□□ -0.35
CTCFL-219ENST00000608720 ZNF84P51523 738 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 RBM39Q14498 530 aaKnown RBP12.85□□□□□ -0.35
CTCFL-219ENST00000608720 CRIP3Q6Q6R5 217 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 CCDC54Q8NEL0 328 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 GJC3Q8NFK1 279 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 OR5D18Q8NGL1 313 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 CYYR1Q96J86 154 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 FAM96BQ9Y3D0 163 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 E9PLN8 166 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 RRP8O43159 456 aaKnown RBP12.85□□□□□ -0.35
CTCFL-219ENST00000608720 SFTPBP07988 381 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 HKR1P10072 659 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 ACKR3P25106 362 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 CLDN17P56750 224 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 CD81P60033 236 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 BTNL8Q6UX41 500 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 FADS6Q8N9I5 356 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 SPACA9Q96E40 222 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-219ENST00000608720 LIN37Q96GY3 246 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-219ENST00000608720 OR6C1Q96RD1 312 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 CNTNAP3Q9BZ76 1288 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 CA14Q9ULX7 337 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 MTCH2Q9Y6C9 303 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 VPS13AQ96RL7 3174 aa12.85□□□□□ -0.35
CTCFL-219ENST00000608720 GPR37O15354 613 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 LRP3O75074 770 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 SCRG1O75711 98 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 TIAF1O95411 115 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 CST4P01036 141 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 KNG1P01042 644 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 FCGR2AP12318 317 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 SERPINA2P20848 420 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 AFF3P51826 1226 aaKnown RBP12.84□□□□□ -0.35
CTCFL-219ENST00000608720 UBE2V2Q15819 145 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 RPL7L1Q6DKI1 246 aaKnown RBP12.84□□□□□ -0.35
CTCFL-219ENST00000608720 ZNF574Q6ZN55 896 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-219ENST00000608720 MAFIPQ8WZ33 124 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 HAS2Q92819 552 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 C10orf35Q96D05 121 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 CHST5Q9GZS9 411 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 PARP11Q9NR21 331 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 C19orf25Q9UFG5 118 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-219ENST00000608720 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 C5orf63A6NC05 138 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 F5H5K5 113 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 NQO2P16083 231 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 HOXA5P20719 270 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 CSNK1A1P48729 337 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 SULT1A2P50226 295 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 LBHQ53QV2 105 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-219ENST00000608720 DHRS11Q6UWP2 260 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 Q6ZSR3 168 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 SGPP2Q8IWX5 399 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 LYPD6BQ8NI32 183 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 NPRL2Q8WTW4 380 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 KIRREL1Q96J84 757 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 RASL10BQ96S79 203 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 SULT4A1Q9BR01 284 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 DEFB126Q9BYW3 111 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 NELFAQ9H3P2 528 aa12.84□□□□□ -0.35
CTCFL-219ENST00000608720 BCAT2O15382 392 aaPredicted RBP12.83□□□□□ -0.36
CTCFL-219ENST00000608720 MED6O75586 246 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 ONECUT2O95948 504 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 IFNA10P01566 189 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 CTSDP07339 412 aaPredicted RBP12.83□□□□□ -0.36
CTCFL-219ENST00000608720 ZNF708P17019 499 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 ITGA3P26006 1051 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 PTGER4P35408 488 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 IAH1Q2TAA2 248 aaPredicted RBP12.83□□□□□ -0.36
CTCFL-219ENST00000608720 DMRTC1Q5HYR2 192 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 C10orf128Q5T292 105 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 SEMA6DQ8NFY4 1073 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 TMEM54Q969K7 222 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 CPNE2Q96FN4 548 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms