RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 PDLIM4P50479 330 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 ID2Q02363 134 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 LINC01590Q5TEZ4 76 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 TMEM225Q6GV28 225 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 MFSD12Q6NUT3 480 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 DPY19L4Q7Z388 723 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 PCGF1Q9BSM1 259 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 ANGPTL4Q9BY76 406 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 FBXO34Q9NWN3 711 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 B4DEV8 164 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 H7C1C5 153 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 CA3P07451 260 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 PSMB5P28074 263 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 ACAA2P42765 397 aaKnown RBP11.09□□□□□ -0.63
CTCFL-218ENST00000608440 LCN6P62502 163 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 SMAD3P84022 425 aaKnown RBP11.09□□□□□ -0.63
CTCFL-218ENST00000608440 TMEM64Q6YI46 380 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 ZNF793Q6ZN11 406 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 FNDC9Q8TBE3 224 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 SCARF2Q96GP6 870 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-218ENST00000608440 VAMP8Q9BV40 100 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 ZNF552Q9H707 407 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-218ENST00000608440 ZNF430Q9H8G1 570 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-218ENST00000608440 KIAA1456Q9P272 454 aa11.09□□□□□ -0.63
CTCFL-218ENST00000608440 APOBEC3BQ9UH17 382 aaKnown RBP11.09□□□□□ -0.63
CTCFL-218ENST00000608440 ETV2O00321 342 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-218ENST00000608440 HSPB1P04792 205 aaKnown RBP11.08□□□□□ -0.64
CTCFL-218ENST00000608440 ZNF41P51814 821 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-218ENST00000608440 GPR18Q14330 331 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 TMEM183BQ1AE95 376 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 TCEAL5Q5H9L2 206 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 PHF19Q5T6S3 580 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 FCRL6Q6DN72 434 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 LILRA6Q6PI73 481 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 GRINAQ7Z429 371 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 MRPL43Q8N983 215 aaKnown RBP11.08□□□□□ -0.64
CTCFL-218ENST00000608440 VN1R17PQ8TDU5 208 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 ADAMTS18Q8TE60 1221 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 PLD4Q96BZ4 506 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 FOXN4Q96NZ1 517 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 OR8B4Q96RC9 309 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 TBL1XR1Q9BZK7 514 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 HCFC1R1Q9NWW0 138 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 IL19Q9UHD0 177 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 DHDHQ9UQ10 334 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 A0A1W2PRU2 124 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 ALOX5APP20292 161 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 RIPPLY3P57055 190 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 FBLN7Q53RD9 439 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 METRNLQ641Q3 311 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 PTCRAQ6ISU1 281 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-218ENST00000608440 OR5T1Q8NG75 326 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 OR4D6Q8NGJ1 314 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 CXorf40AQ8TE69 158 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 GLYATL1Q969I3 302 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 AMELYQ99218 206 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 KLF16Q9BXK1 252 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-218ENST00000608440 PCBD2Q9H0N5 130 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 MRPS28Q9Y2Q9 187 aaKnown RBP11.08□□□□□ -0.64
CTCFL-218ENST00000608440 A0A1W2PR48 441 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 AQP7P3A6NL99 342 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 ZNF217O75362 1048 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 CDKN2AP42771 156 aaKnown RBP11.08□□□□□ -0.64
CTCFL-218ENST00000608440 DMWDQ09019 674 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 CDCP2Q5VXM1 449 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 RNF44Q7L0R7 432 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 SLC16A9Q7RTY1 509 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 AGBL5Q8NDL9 886 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 TMEM170AQ8WVE7 144 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 TNFRSF14Q92956 283 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 MRPL24Q96A35 216 aaKnown RBP11.08□□□□□ -0.64
CTCFL-218ENST00000608440 SLC25A44Q96H78 314 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-218ENST00000608440 C4orf45Q96LM5 186 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 WWTR1Q9GZV5 400 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 WDR76Q9H967 626 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 P4HTMQ9NXG6 502 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 SLC7A11Q9UPY5 501 aa11.08□□□□□ -0.64
CTCFL-218ENST00000608440 DTYMKP23919 212 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 RBMXP38159 391 aaKnown RBP11.07□□□□□ -0.64
CTCFL-218ENST00000608440 ZFP36L1Q07352 338 aaKnown RBP11.07□□□□□ -0.64
CTCFL-218ENST00000608440 EIPR1Q53HC9 387 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 AGBL4Q5VU57 503 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 DPPA3Q6W0C5 159 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 SYT13Q7L8C5 426 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 CALHM1Q8IU99 346 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 MFSD9Q8NBP5 474 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 DYRK2Q92630 601 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 RBKSQ9H477 322 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 GNG13Q9P2W3 67 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 MTCL1Q9Y4B5 1905 aaKnown RBP11.07□□□□□ -0.64
CTCFL-218ENST00000608440 OPN1LWP04000 364 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 CSNK2A2P19784 350 aaPredicted RBP11.07□□□□□ -0.64
CTCFL-218ENST00000608440 BTN3A2P78410 334 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 IL24Q13007 206 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 OCIAD2Q56VL3 154 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 ALG10BQ5I7T1 473 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 ZNF506Q5JVG8 444 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 HSD11B1LQ7Z5J1 315 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 WFDC8Q8IUA0 241 aa11.07□□□□□ -0.64
CTCFL-218ENST00000608440 NKAIN3Q8N8D7 197 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms