RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 CDS1Q92903 461 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 ISOC2Q96AB3 205 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 FAM3DQ96BQ1 224 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 LRRC58Q96CX6 371 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 CMTM5Q96DZ9 223 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 MICU1Q9BPX6 476 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 HOPXQ9BPY8 73 aaPredicted RBP3.6□□□□□ -1.83
LINC00397-202ENST00000606785 DEFB129Q9H1M3 183 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 HRASLSQ9HDD0 168 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 TMEM138Q9NPI0 162 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 IFNKQ9P0W0 207 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 ZNF629Q9UEG4 869 aaPredicted RBP3.6□□□□□ -1.83
LINC00397-202ENST00000606785 MRM2Q9UI43 246 aaKnown RBP3.6□□□□□ -1.83
LINC00397-202ENST00000606785 KCNE3Q9Y6H6 103 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 MROH7Q68CQ1 1323 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 ADGRA3Q8IWK6 1321 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 ZNF532Q9HCE3 1301 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 WNK3Q9BYP7 1800 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 SPEF2Q9C093 1822 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 ARHGEF10O15013 1369 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 BCL9O00512 1426 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 VPS8Q8N3P4 1428 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 PDS5BQ9NTI5 1447 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 RAPGEF2Q9Y4G8 1499 aa3.6□□□□□ -1.83
LINC00397-202ENST00000606785 SMARCA4P51532 1647 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 CEP152O94986 1710 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 G3V2T6 193 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 K7EP13 123 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 M0R036 132 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 BHLHE40O14503 412 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 CCNE2O96020 404 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 ZNF806P0C7X5 589 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 IFI30P13284 250 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 SPI1P17947 270 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 KLK2P20151 261 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 FUT3P21217 361 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 RPL5P46777 297 aaKnown RBP3.59□□□□□ -1.83
LINC00397-202ENST00000606785 IDH2P48735 452 aaKnown RBP3.59□□□□□ -1.83
LINC00397-202ENST00000606785 CYB561P49447 251 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 CCR6P51684 374 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 NCBP2P52298 156 aaKnown RBP eCLIP3.59□□□□□ -1.83
LINC00397-202ENST00000606785 VSX2P58304 361 aaPredicted RBP3.59□□□□□ -1.83
LINC00397-202ENST00000606785 LYZP61626 148 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 LSM6P62312 80 aaKnown RBP3.59□□□□□ -1.83
LINC00397-202ENST00000606785 CKAP4Q07065 602 aaKnown RBP3.59□□□□□ -1.83
LINC00397-202ENST00000606785 PRPSAP1Q14558 356 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 OR4D1Q15615 310 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 GABRA6Q16445 453 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 IL17AQ16552 155 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 ZNF630Q2M218 657 aaPredicted RBP3.59□□□□□ -1.83
LINC00397-202ENST00000606785 RSBN1Q5VWQ0 802 aaPredicted RBP3.59□□□□□ -1.83
LINC00397-202ENST00000606785 OTPQ5XKR4 325 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 LPCAT3Q6P1A2 487 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 TEX43Q6ZNM6 134 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 OAFQ86UD1 273 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 CRLF3Q8IUI8 442 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 C11orf42Q8N5U0 333 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 TMEM156Q8N614 296 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 LINC00612Q8N6U2 182 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 SUMF2Q8NBJ7 301 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 OR51F2Q8NH61 342 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 DNAJB3Q8WWF6 145 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 PPWD1Q96BP3 646 aaKnown RBP3.59□□□□□ -1.83
LINC00397-202ENST00000606785 SMIM12Q96EX1 92 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 C14orf144Q96I85 54 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 COL21A1Q96P44 957 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 STACQ99469 402 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 FOXC2Q99958 501 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 DCUN1D5Q9BTE7 237 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 MED18Q9BUE0 208 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 PDCD10Q9BUL8 212 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 TMEM109Q9BVC6 243 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 TMEM9BQ9NQ34 198 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 NIT2Q9NQR4 276 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 FGFR1OP2Q9NVK5 253 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 RPL26L1Q9UNX3 145 aaKnown RBP3.59□□□□□ -1.83
LINC00397-202ENST00000606785 OR51B4Q9Y5P0 310 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 HEBP2Q9Y5Z4 205 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 F11RQ9Y624 299 aaKnown RBP3.59□□□□□ -1.83
LINC00397-202ENST00000606785 KPTNQ9Y664 436 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 RTL1A6NKG5 1358 aa3.59□□□□□ -1.83
LINC00397-202ENST00000606785 ZNF608Q9ULD9 1512 aaPredicted RBP3.59□□□□□ -1.84
LINC00397-202ENST00000606785 KIF21AQ7Z4S6 1674 aa3.59□□□□□ -1.84
LINC00397-202ENST00000606785 SLC22A20A6NK97 555 aa3.58□□□□□ -1.84
LINC00397-202ENST00000606785 DFFAO00273 331 aa3.58□□□□□ -1.84
LINC00397-202ENST00000606785 PLPP1O14494 284 aa3.58□□□□□ -1.84
LINC00397-202ENST00000606785 SRSF10O75494 262 aaKnown RBP3.58□□□□□ -1.84
LINC00397-202ENST00000606785 PSMG1O95456 288 aa3.58□□□□□ -1.84
LINC00397-202ENST00000606785 CYB5R3P00387 301 aaPredicted RBP3.58□□□□□ -1.84
LINC00397-202ENST00000606785 TCRBP04435 133 aa3.58□□□□□ -1.84
LINC00397-202ENST00000606785 HOXC4P09017 264 aaPredicted RBP3.58□□□□□ -1.84
LINC00397-202ENST00000606785 TACSTD2P09758 323 aa3.58□□□□□ -1.84
LINC00397-202ENST00000606785 GTF2F2P13984 249 aa3.58□□□□□ -1.84
LINC00397-202ENST00000606785 UCHL3P15374 230 aa3.58□□□□□ -1.84
LINC00397-202ENST00000606785 KCNE1P15382 129 aa3.58□□□□□ -1.84
LINC00397-202ENST00000606785 CRISP2P16562 243 aa3.58□□□□□ -1.84
LINC00397-202ENST00000606785 BGNP21810 368 aa3.58□□□□□ -1.84
LINC00397-202ENST00000606785 F2RP25116 425 aa3.58□□□□□ -1.84
LINC00397-202ENST00000606785 KDELR2P33947 212 aa3.58□□□□□ -1.84
LINC00397-202ENST00000606785 RND2P52198 227 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms