RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 NSUN5P2Q63ZY6 315 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 CNTNAP3BQ96NU0 1288 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 ZNF700Q9H0M5 742 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 C1orf123Q9NWV4 160 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 IGKV1-27A0A075B6S5 117 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 CCL4P13236 92 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 NTF4P34130 210 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 ARL6IP1Q15041 203 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 FAM27BQ5VT28 67 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 H3F3CQ6NXT2 135 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 C20orf196Q8IYI0 205 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 NAXEQ8NCW5 288 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 TAF9BQ9HBM6 251 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 MEMO1Q9Y316 297 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 KLK3P07288 261 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 CYC1P08574 325 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 PATE4P0C8F1 98 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 OPRM1P35372 400 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 PJVKQ0ZLH3 352 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 IL11RAQ14626 422 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 EXT1Q16394 746 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 C10orf91Q5T1B1 145 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 ZNF774Q6NX45 483 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 NAT6Q93015 286 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 ANXA10Q9UJ72 324 aa17.63■□□□□ 0.41
SHKBP1-225ENST00000600733 SGCEO43556 437 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 CA11O75493 328 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 APOC1P02654 83 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 CRYGSP22914 178 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 MRPS34P82930 218 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 SGPP2Q8IWX5 399 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 OR5T2Q8NGG2 359 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 SLC39A7Q92504 469 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 DYRK2Q92630 601 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 C10orf35Q96D05 121 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 REEP6Q96HR9 211 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 CNTNAP3Q9BZ76 1288 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 SH2D2AQ9NP31 389 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 UQCC1Q9NVA1 299 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 HPF1Q9NWY4 346 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 AK3Q9UIJ7 227 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 LHX6Q9UPM6 363 aa17.62■□□□□ 0.41
SHKBP1-225ENST00000600733 RRP8O43159 456 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 OR5H8P0DN80 308 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 IL32P24001 234 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 LPAR6P43657 344 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 SUCLG1P53597 346 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 RAC1P63000 192 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 PPA1Q15181 289 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 RSU1Q15404 277 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 RTL6Q6ICC9 239 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 HAGHLQ6PII5 290 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 RPS19BP1Q86WX3 136 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 CPNE2Q96FN4 548 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 CRLF2Q9HC73 371 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 PADI1Q9ULC6 663 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 CARHSP1Q9Y2V2 147 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 SIT1Q9Y3P8 196 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 A0A0G2JMM0 328 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 A0A1W2PPB8 328 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 A0A1W2PRS3 328 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 KIR3DP1A8MWS1 328 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 NME2P22392 152 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 BRICD5Q6PL45 260 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 PLXDC2Q6UX71 529 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 IL34Q6ZMJ4 242 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 FNDC9Q8TBE3 224 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 MRPL24Q96A35 216 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 SMIM8Q96KF7 97 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 METTL9Q9H1A3 318 aa17.61■□□□□ 0.41
SHKBP1-225ENST00000600733 CCDC187A0A096LP49 1063 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 CRYM-AS1A6NIL9 109 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 NUDT19A8MXV4 375 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 SYNGR3O43761 229 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 CTSDP07339 412 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 MUC1P15941 1255 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 YRDCQ86U90 279 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 TOMM40LQ969M1 308 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 ALKBH3Q96Q83 286 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 RHOFQ9HBH0 211 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 TNRC18O15417 2968 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 NCKAP5O14513 1909 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 FBXO24O75426 580 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 MED6O75586 246 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 LCATP04180 440 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 B4GALT1P15291 398 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 RPL12P30050 165 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 NPBWR1P48145 328 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 RAB35Q15286 201 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 SP6Q3SY56 376 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 GGNBP1Q5YKI7 109 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 AKR7LQ8NHP1 331 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 M1APQ8TC57 530 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 SPSB1Q96BD6 273 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 PILRBQ9UKJ0 227 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 TRIOBPQ9H2D6 2365 aa17.6■□□□□ 0.41
SHKBP1-225ENST00000600733 K7EPK0 472 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 CFIP05156 583 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 HFEQ30201 348 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 FAM71E2Q8N5Q1 922 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms