RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 OR5D13Q8NGL4 314 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 OR14K1Q8NGZ2 314 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 OR2T27Q8NH04 317 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 ZNRD1Q9P1U0 126 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 GTF2A1LQ9UNN4 478 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 POLDIP2Q9Y2S7 368 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 MGAM2Q2M2H8 2515 aa12.96□□□□□ -0.34
VRK3-221ENST00000600284 PQLC2LA1A4F0 135 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 BTBD17A6NE02 478 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 J3QT63 122 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 GPR137BO60478 399 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 TFF1P04155 84 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 KRT8P05787 483 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 PGA5P0DJD9 388 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 CCL1P22362 96 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 HAAOP46952 286 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 ZNF561Q8N587 486 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 CCDC54Q8NEL0 328 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 TMEM185AQ8NFB2 350 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 OR51G2Q8NGK0 314 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 OR8J1Q8NGP2 316 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 WFDC12Q8WWY7 111 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 CENPNQ96H22 339 aaPredicted RBP12.95□□□□□ -0.34
VRK3-221ENST00000600284 CIB1Q99828 191 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 GABARAPL3Q9BY60 117 aa12.95□□□□□ -0.34
VRK3-221ENST00000600284 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.95□□□□□ -0.34
VRK3-221ENST00000600284 A0A1W2PPH5 198 aa12.94□□□□□ -0.34
VRK3-221ENST00000600284 RFPL4AA6NLU0 287 aa12.94□□□□□ -0.34
VRK3-221ENST00000600284 RFPL4AL1F8VTS6 287 aa12.94□□□□□ -0.34
VRK3-221ENST00000600284 SLC1A7O00341 560 aa12.94□□□□□ -0.34
VRK3-221ENST00000600284 MAGEB4O15481 346 aaPredicted RBP12.94□□□□□ -0.34
VRK3-221ENST00000600284 SULT1C4O75897 302 aa12.94□□□□□ -0.34
VRK3-221ENST00000600284 MPZP25189 248 aa12.94□□□□□ -0.34
VRK3-221ENST00000600284 PRDX2P32119 198 aa12.94□□□□□ -0.34
VRK3-221ENST00000600284 OCLNQ16625 522 aa12.94□□□□□ -0.34
VRK3-221ENST00000600284 DMRTC1Q5HYR2 192 aa12.94□□□□□ -0.34
VRK3-221ENST00000600284 TREML4Q6UXN2 200 aa12.94□□□□□ -0.34
VRK3-221ENST00000600284 YIPF7Q8N8F6 280 aa12.94□□□□□ -0.34
VRK3-221ENST00000600284 OR5R1Q8NH85 324 aa12.94□□□□□ -0.34
VRK3-221ENST00000600284 SLC22A13Q9Y226 551 aa12.94□□□□□ -0.34
VRK3-221ENST00000600284 SF3B6Q9Y3B4 125 aaKnown RBP12.94□□□□□ -0.34
VRK3-221ENST00000600284 A0A1W2PQL4 384 aaPredicted RBP12.93□□□□□ -0.34
VRK3-221ENST00000600284 METTL15A6NJ78 407 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 SYNGR1O43759 233 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 PAHP00439 452 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 TAF9Q16594 264 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 MIDNQ504T8 468 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 ASRGL1Q7L266 308 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 SSX6Q7RTT6 188 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 CATSPERDQ86XM0 798 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 CD177Q8N6Q3 437 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 ZSCAN4Q8NAM6 433 aaPredicted RBP12.93□□□□□ -0.34
VRK3-221ENST00000600284 LINC01006Q8NI28 216 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 TRUB1Q8WWH5 349 aaKnown RBP12.93□□□□□ -0.34
VRK3-221ENST00000600284 RFKQ969G6 155 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 CITED1Q99966 193 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 RBM4BQ9BQ04 359 aaKnown RBP12.93□□□□□ -0.34
VRK3-221ENST00000600284 NRIP2Q9BQI9 281 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 PKIBQ9C010 78 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 C16orf95Q9H693 158 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 HES4Q9HCC6 221 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 GPR173Q9NS66 373 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 VPREB3Q9UKI3 123 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 OAZ3Q9UMX2 235 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 RNF114Q9Y508 228 aa12.93□□□□□ -0.34
VRK3-221ENST00000600284 MEIOCA2RUB1 952 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 H0YAE9 185 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 CIB2O75838 187 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 CLPXO76031 633 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 RPP14O95059 124 aaKnown RBP12.92□□□□□ -0.34
VRK3-221ENST00000600284 NXPH2O95156 264 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 SAA4P35542 130 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 POLR2IP36954 125 aaKnown RBP12.92□□□□□ -0.34
VRK3-221ENST00000600284 CAPZA1P52907 286 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 CDC42P60953 191 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 ERVK11-1P61568 191 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 IL24Q13007 206 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 KLRD1Q13241 179 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 PLEKHG7Q6ZR37 379 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 CALHM1Q8IU99 346 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 FAM185AQ8N0U4 392 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 BEND2Q8NDZ0 799 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 C10orf35Q96D05 121 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 FAM234AQ9H0X4 552 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 SEMA6AQ9H2E6 1030 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 ELL3Q9HB65 397 aaPredicted RBP12.92□□□□□ -0.34
VRK3-221ENST00000600284 SLC7A11Q9UPY5 501 aa12.92□□□□□ -0.34
VRK3-221ENST00000600284 hCG_1809904A0A1W2PP81 198 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 A0A1W2PPE2 198 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 A0A1W2PR64 198 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 A0A1W2PRV1 198 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 ANKRD61A6NGH8 418 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 SYT7O43581 403 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 TSPAN9O75954 239 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 ATP6V1E1P36543 226 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 TGFBR2P37173 567 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 DLX1P56177 255 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 RPL31P62899 125 aaKnown RBP12.91□□□□□ -0.34
VRK3-221ENST00000600284 HCP5Q6MZN7 132 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 BRICD5Q6PL45 260 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms