RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 EXOGQ9Y2C4 368 aaKnown RBP11.72□□□□□ -0.53
LIG1-218ENST00000599322 DOCK11Q5JSL3 2073 aa11.72□□□□□ -0.53
LIG1-218ENST00000599322 A6NIN4 97 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 H3BSH0 61 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.71□□□□□ -0.53
LIG1-218ENST00000599322 SIGLEC5O15389 551 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 RHBDL1O75783 438 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 ACAA1P09110 424 aaPredicted RBP11.71□□□□□ -0.53
LIG1-218ENST00000599322 IGHV4-38-2P0DP08 117 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 DBTP11182 482 aaKnown RBP11.71□□□□□ -0.53
LIG1-218ENST00000599322 PRKACBP22694 351 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 EEF1B2P24534 225 aaKnown RBP11.71□□□□□ -0.53
LIG1-218ENST00000599322 CCR9P51686 369 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 GBX2P52951 348 aaPredicted RBP11.71□□□□□ -0.53
LIG1-218ENST00000599322 ATP1B3P54709 279 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 ZNF91Q05481 1191 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 GALEQ14376 348 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 TMEM42Q69YG0 159 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 C9orf139Q6ZV77 190 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 ENTHD1Q8IYW4 607 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 PACRGLQ8N7B6 248 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 OR2G2Q8NGZ5 317 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 ANGPTL6Q8NI99 470 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 TRMT10AQ8TBZ6 339 aaKnown RBP11.71□□□□□ -0.53
LIG1-218ENST00000599322 TBC1D15Q8TC07 691 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 DACT3Q96B18 629 aaPredicted RBP11.71□□□□□ -0.53
LIG1-218ENST00000599322 LGALS12Q96DT0 336 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 SEH1LQ96EE3 360 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 ALG8Q9BVK2 526 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 PKIBQ9C010 78 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 COMMD4Q9H0A8 199 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 CHCHD3Q9NX63 227 aaKnown RBP11.71□□□□□ -0.53
LIG1-218ENST00000599322 HHLA2Q9UM44 414 aa11.71□□□□□ -0.53
LIG1-218ENST00000599322 LOC107986453A0A1B0GWG9 222 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 hCG_1809904A0A1W2PP81 198 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 A0A1W2PPE2 198 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 A0A1W2PR64 198 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 A0A1W2PRV1 198 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 PQLC2LA1A4F0 135 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 NOS1APO75052 506 aaPredicted RBP11.7□□□□□ -0.54
LIG1-218ENST00000599322 PLATP00750 562 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 CCDC159P0C7I6 412 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 PSG2P11465 335 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 PRTN3P24158 256 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 RBP2P50120 134 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 CAV3P56539 151 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 OR12D2P58182 307 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 UBA52P62987 128 aaKnown RBP11.7□□□□□ -0.54
LIG1-218ENST00000599322 GUCA2AQ02747 115 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 DMRTC1Q5HYR2 192 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 LPCAT4Q643R3 524 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 ACP7Q6ZNF0 438 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 Q6ZSR3 168 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 LHFPL3Q86UP9 236 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 MKXQ8IYA7 352 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 BCL6BQ8N143 479 aaPredicted RBP11.7□□□□□ -0.54
LIG1-218ENST00000599322 SYS1Q8N2H4 156 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 KIR3DL3Q8N743 410 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 NPRL2Q8WTW4 380 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 CYGBQ8WWM9 190 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 LHX4Q969G2 390 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 C4orf36Q96KX1 117 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 DCTN5Q9BTE1 182 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 CHST5Q9GZS9 411 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 NOX4Q9NPH5 578 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 GLS2Q9UI32 602 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 FAM96BQ9Y3D0 163 aa11.7□□□□□ -0.54
LIG1-218ENST00000599322 TRBV23-1A0A0A0MS06 115 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 RFPL4AA6NLU0 287 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 RFPL4AL1F8VTS6 287 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 ISG15P05161 165 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 CRYBA1P05813 215 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 PGA5P0DJD9 388 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 PRDX2P32119 198 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 FOXL1Q12952 345 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 IL24Q13007 206 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 ALKBH1Q13686 389 aaKnown RBP11.69□□□□□ -0.54
LIG1-218ENST00000599322 RCN1Q15293 331 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 LRRC36Q1X8D7 754 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 FDX2Q6P4F2 183 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 BRD3OSQ6XYD6 125 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 TMPRSS11AQ6ZMR5 421 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 Q8IYB0 196 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 PRSS35Q8N3Z0 413 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 ZNF561Q8N587 486 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 DHRSXQ8N5I4 330 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 C3orf56Q8N813 242 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 ZDHHC22Q8N966 263 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 LY6G5BQ8NDX9 201 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 DNAAF1Q8NEP3 725 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 OR13C3Q8NGS6 347 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 FGGYQ96C11 551 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 GAFA1Q96PS6 74 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 FGF23Q9GZV9 251 aaPredicted RBP11.69□□□□□ -0.54
LIG1-218ENST00000599322 AMBNQ9NP70 447 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 OR14J1Q9UGF5 321 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 PCDHGB5Q9Y5G0 923 aa11.69□□□□□ -0.54
LIG1-218ENST00000599322 IGHV1-69DA0A0B4J2H0 117 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 DNAJC9-AS1A6NH13 148 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 H0YAE9 185 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms