RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 CD80P33681 288 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 TGFBR2P37173 567 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 IL24Q13007 206 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 KCNJ8Q15842 424 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 CEACAM19Q7Z692 300 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 CALHM1Q8IU99 346 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 POC1AQ8NBT0 407 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 OR51A2Q8NGJ7 313 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 CLDND2Q8NHS1 167 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 PHYHIPQ92561 330 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 MUL1Q969V5 352 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 ORAI1Q96D31 301 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 TMUB1Q9BVT8 246 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 FLNAP21333 2647 aaKnown RBP12.05□□□□□ -0.48
VRK3-213ENST00000597215 OOEPA6NGQ2 149 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 TRIM64CA6NLI5 447 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 C3orf80F5H4A9 247 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 WNT9BO14905 357 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 PIN1P1O15428 100 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 AKR7A2O43488 359 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 SYNGR1O43759 233 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 NOS1APO75052 506 aaPredicted RBP12.04□□□□□ -0.48
VRK3-213ENST00000597215 CYB5AP00167 134 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 PLATP00750 562 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 PGA5P0DJD9 388 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 CD99P14209 185 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 FOSL1P15407 271 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 POU3F4P49335 361 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 INSL4Q14641 139 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 KISS1Q15726 138 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 MICBQ29980 383 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 ZNF404Q494X3 552 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 SYT6Q5T7P8 510 aaPredicted RBP12.04□□□□□ -0.48
VRK3-213ENST00000597215 TEX36Q5VZQ5 186 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 SFRP4Q6FHJ7 346 aaPredicted RBP12.04□□□□□ -0.48
VRK3-213ENST00000597215 SLC25A26Q70HW3 274 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 MKXQ8IYA7 352 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 MAPK1IP1LQ8NDC0 245 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 C19orf18Q8NEA5 215 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 DEFB108BQ8NET1 73 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 RFT1Q96AA3 541 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 RAB39BQ96DA2 213 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 C18orf12Q96KH6 178 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 SPACA5Q96QH8 159 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 TMEM165Q9HC07 324 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 DNAJB11Q9UBS4 358 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 PCDHB10Q9UN67 800 aa12.04□□□□□ -0.48
VRK3-213ENST00000597215 ZNF469Q96JG9 3925 aaPredicted RBP12.04□□□□□ -0.48
VRK3-213ENST00000597215 TRAV8-7A0A075B6U6 113 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 GABRPO00591 440 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 ARL6IP5O75915 188 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 ACAA1P09110 424 aaPredicted RBP12.03□□□□□ -0.48
VRK3-213ENST00000597215 UCHL1P09936 223 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 MUC1P15941 1255 aaPredicted RBP12.03□□□□□ -0.48
VRK3-213ENST00000597215 GLRA1P23415 457 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 GP2P55259 537 aaKnown RBP12.03□□□□□ -0.48
VRK3-213ENST00000597215 GMFBP60983 142 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 HOXA4Q00056 320 aaPredicted RBP12.03□□□□□ -0.48
VRK3-213ENST00000597215 FABP5Q01469 135 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 PDZK1IP1Q13113 114 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 HSD17B12Q53GQ0 312 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 FAM27D1Q5T7N8 215 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 DDI2Q5TDH0 399 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 TMEM91Q6ZNR0 172 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 DCDC5Q6ZRR9 648 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 SATL1Q86VE3 508 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 OR52N4Q8NGI2 321 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 TMIGD2Q96BF3 282 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 C12orf43Q96C57 262 aaKnown RBP12.03□□□□□ -0.48
VRK3-213ENST00000597215 CEP19Q96LK0 163 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 GPER1Q99527 375 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 TMEM246Q9BRR3 403 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 SLITRK2Q9H156 845 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 ZNF665Q9H7R5 613 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 TCF7L1Q9HCS4 588 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 RASL12Q9NYN1 266 aa12.03□□□□□ -0.48
VRK3-213ENST00000597215 IGHV3OR15-7A0A075B7D8 119 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 CEACAM18A8MTB9 384 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.02□□□□□ -0.49
VRK3-213ENST00000597215 NDUFA2O43678 99 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 NXPH2O95156 264 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 IGHV2-5P01817 119 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 MAS1P04201 325 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 INHBBP09529 407 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 SMIM18P0DKX4 95 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 GALP22466 123 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 CPT2P23786 658 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 LMO4P61968 165 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 TMEM249Q2WGJ8 235 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 SMIM21Q3B7S5 101 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 CD200R1LQ6Q8B3 271 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 FAM90A1Q86YD7 464 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 Q8IYB0 196 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 SAXO1Q8IYX7 474 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 NKAIN3Q8N8D7 197 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 PNLDC1Q8NA58 520 aaKnown RBP12.02□□□□□ -0.49
VRK3-213ENST00000597215 ZSCAN4Q8NAM6 433 aaPredicted RBP12.02□□□□□ -0.49
VRK3-213ENST00000597215 OR5D18Q8NGL1 313 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 SLAMF9Q96A28 289 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 NRIP2Q9BQI9 281 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms