RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ZNF788Q6ZQV5 615 aa12.03□□□□□ -0.48
PNKP-202ENST00000593706 CCDC121Q6ZUS5 278 aa12.03□□□□□ -0.48
PNKP-202ENST00000593706 KRT77Q7Z794 578 aa12.03□□□□□ -0.48
PNKP-202ENST00000593706 GID4Q8IVV7 300 aa12.03□□□□□ -0.48
PNKP-202ENST00000593706 TMEM185AQ8NFB2 350 aa12.03□□□□□ -0.48
PNKP-202ENST00000593706 OR2T6Q8NHC8 308 aa12.03□□□□□ -0.48
PNKP-202ENST00000593706 OR5P3Q8WZ94 311 aa12.03□□□□□ -0.48
PNKP-202ENST00000593706 TNFRSF14Q92956 283 aa12.03□□□□□ -0.48
PNKP-202ENST00000593706 SSX3Q99909 188 aa12.03□□□□□ -0.48
PNKP-202ENST00000593706 ELL3Q9HB65 397 aaPredicted RBP12.03□□□□□ -0.48
PNKP-202ENST00000593706 CLN6Q9NWW5 311 aa12.03□□□□□ -0.48
PNKP-202ENST00000593706 NUFIP1Q9UHK0 495 aaKnown RBP12.03□□□□□ -0.48
PNKP-202ENST00000593706 SIGLEC9Q9Y336 463 aa12.03□□□□□ -0.48
PNKP-202ENST00000593706 TMEM14AQ9Y6G1 99 aa12.03□□□□□ -0.48
PNKP-202ENST00000593706 TMEM269A0A1B0GVZ9 245 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 OR2AT4A6NND4 320 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 SIGLEC5O15389 551 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 OPN1MWP04001 364 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 OPN1MW2P0DN77 364 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 OPN1MW3P0DN78 364 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 GLRA1P23415 457 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 HTR1FP30939 366 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 CAV3P56539 151 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 LRRC75BQ2VPJ9 315 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 ZNF684Q5T5D7 378 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 HIST2H2BDQ6DRA6 164 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 ZFP1Q6P2D0 407 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 ZNF322Q6U7Q0 402 aaPredicted RBP12.02□□□□□ -0.49
PNKP-202ENST00000593706 SSX6Q7RTT6 188 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 SLC35F2Q8IXU6 374 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 ZDHHC23Q8IYP9 409 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 FAM185AQ8N0U4 392 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 KLHDC1Q8N7A1 406 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 OR5D13Q8NGL4 314 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 ANGPTL6Q8NI99 470 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 PIGCQ92535 297 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 RNF170Q96K19 258 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 MNTQ99583 582 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 MROQ9BYG7 248 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 TTTY10Q9BZA0 68 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 PBOV1Q9GZY1 135 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 RAB18Q9NP72 206 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 USE1Q9NZ43 259 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 NLKQ9UBE8 527 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 MRM2Q9UI43 246 aaKnown RBP12.02□□□□□ -0.49
PNKP-202ENST00000593706 SF3B6Q9Y3B4 125 aaKnown RBP12.02□□□□□ -0.49
PNKP-202ENST00000593706 DNAH3Q8TD57 4116 aa12.02□□□□□ -0.49
PNKP-202ENST00000593706 PIN1P1O15428 100 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 MAGEB4O15481 346 aaPredicted RBP12.01□□□□□ -0.49
PNKP-202ENST00000593706 PRB2P02812 416 aaPredicted RBP12.01□□□□□ -0.49
PNKP-202ENST00000593706 ACAA1P09110 424 aaPredicted RBP12.01□□□□□ -0.49
PNKP-202ENST00000593706 EFNB2P52799 333 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 CAPZA1P52907 286 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 CXCR4P61073 352 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 FAM189A2Q15884 450 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 FBLN7Q53RD9 439 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 Q6ZSR3 168 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 OR8J1Q8NGP2 316 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 PPP1R35Q8TAP8 253 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 FAM81AQ8TBF8 368 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 RORBQ92753 470 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 ITFG2Q969R8 447 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 PPP1R14AQ96A00 147 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 HIST1H2AAQ96QV6 131 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 APOL4Q9BPW4 351 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 RIBC2Q9H4K1 309 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 WARS2Q9UGM6 360 aaKnown RBP12.01□□□□□ -0.49
PNKP-202ENST00000593706 FOXJ3Q9UPW0 622 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 MAB21L2Q9Y586 359 aa12.01□□□□□ -0.49
PNKP-202ENST00000593706 TRBV23-1A0A0A0MS06 115 aa12□□□□□ -0.49
PNKP-202ENST00000593706 EI24O14681 340 aa12□□□□□ -0.49
PNKP-202ENST00000593706 TTRP02766 147 aa12□□□□□ -0.49
PNKP-202ENST00000593706 KIR2DS4P43632 304 aa12□□□□□ -0.49
PNKP-202ENST00000593706 GPM6AP51674 278 aa12□□□□□ -0.49
PNKP-202ENST00000593706 RIDAP52758 137 aaKnown RBP12□□□□□ -0.49
PNKP-202ENST00000593706 ZNF829Q3KNS6 432 aaPredicted RBP12□□□□□ -0.49
PNKP-202ENST00000593706 SAMD5Q5TGI4 173 aa12□□□□□ -0.49
PNKP-202ENST00000593706 ZNRF1Q8ND25 227 aa12□□□□□ -0.49
PNKP-202ENST00000593706 OR51E1Q8TCB6 317 aa12□□□□□ -0.49
PNKP-202ENST00000593706 C17orf50Q8WW18 174 aa12□□□□□ -0.49
PNKP-202ENST00000593706 RNF166Q96A37 237 aaPredicted RBP12□□□□□ -0.49
PNKP-202ENST00000593706 EME1Q96AY2 570 aa12□□□□□ -0.49
PNKP-202ENST00000593706 NPFFR1Q9GZQ6 430 aa12□□□□□ -0.49
PNKP-202ENST00000593706 RANBP3Q9H6Z4 567 aaPredicted RBP12□□□□□ -0.49
PNKP-202ENST00000593706 GPR84Q9NQS5 396 aa12□□□□□ -0.49
PNKP-202ENST00000593706 IGKV1D-17A0A075B6S4 117 aa11.99□□□□□ -0.49
PNKP-202ENST00000593706 A0A1B0GTI1 187 aa11.99□□□□□ -0.49
PNKP-202ENST00000593706 A0A1W2PQL4 384 aaPredicted RBP11.99□□□□□ -0.49
PNKP-202ENST00000593706 RHBDL1O75783 438 aa11.99□□□□□ -0.49
PNKP-202ENST00000593706 ALX3O95076 343 aa11.99□□□□□ -0.49
PNKP-202ENST00000593706 VSIG10L2P0DP72 767 aa11.99□□□□□ -0.49
PNKP-202ENST00000593706 ATP6V1B1P15313 513 aa11.99□□□□□ -0.49
PNKP-202ENST00000593706 ISL1P61371 349 aa11.99□□□□□ -0.49
PNKP-202ENST00000593706 SLC25A30Q5SVS4 291 aa11.99□□□□□ -0.49
PNKP-202ENST00000593706 KPRPQ5T749 579 aaPredicted RBP11.99□□□□□ -0.49
PNKP-202ENST00000593706 ZBTB37Q5TC79 503 aa11.99□□□□□ -0.49
PNKP-202ENST00000593706 TMEM42Q69YG0 159 aa11.99□□□□□ -0.49
PNKP-202ENST00000593706 PLEKHG7Q6ZR37 379 aa11.99□□□□□ -0.49
PNKP-202ENST00000593706 REC114Q7Z4M0 266 aa11.99□□□□□ -0.49
PNKP-202ENST00000593706 COMMD2Q86X83 199 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms