RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 USE1Q9NZ43 259 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 PIGLQ9Y2B2 252 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 B2RBV5 119 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 SLC1A7O00341 560 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 DCTN3O75935 186 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 ALX3O95076 343 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 CST1P01037 141 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 MRPL3P09001 348 aaKnown RBP13.22□□□□□ -0.29
LIG1-205ENST00000593425 PGA5P0DJD9 388 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 RAP2AP10114 183 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 ATP6V1B1P15313 513 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 PRDX2P32119 198 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 RAB13P51153 203 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 LGALS4P56470 323 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 CDK5Q00535 292 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 MFGE8Q08431 387 aaPredicted RBP13.22□□□□□ -0.29
LIG1-205ENST00000593425 RIPPLY1Q0D2K3 151 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 GK3PQ14409 553 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 HS3ST5Q8IZT8 346 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 OR2T27Q8NH04 317 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 MRAPQ8TCY5 172 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 TEAD3Q99594 435 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 TCF19Q9Y242 345 aa13.22□□□□□ -0.29
LIG1-205ENST00000593425 A0A1W2PPH5 198 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 FAM90A8PA6NJQ4 464 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 ACOD1A6NK06 481 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 ADARB2-AS1A8MUL3 147 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 VGLL3A8MV65 326 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 PIPP12273 146 aaPredicted RBP13.21□□□□□ -0.29
LIG1-205ENST00000593425 OSMP13725 252 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 HAAOP46952 286 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 DLX6P56179 175 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 APOFQ13790 326 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 LDLRAD2Q5SZI1 272 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 ZBTB37Q5TC79 503 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 TMEM236Q5W0B7 351 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 PIGWQ7Z7B1 504 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 TMEM219Q86XT9 240 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 ARHGAP24Q8N264 748 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 Q8N2B8 174 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 WIPF2Q8TF74 440 aaPredicted RBP13.21□□□□□ -0.29
LIG1-205ENST00000593425 OR8B4Q96RC9 309 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 CHID1Q9BWS9 393 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 ENPP5Q9UJA9 477 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 COPS3Q9UNS2 423 aa13.21□□□□□ -0.29
LIG1-205ENST00000593425 MEX3AA1L020 520 aaKnown RBP13.2□□□□□ -0.3
LIG1-205ENST00000593425 CCDC182A6NF36 153 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 J3QT63 122 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 GSC2O15499 205 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 XPNPEP2O43895 674 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 DHRS3O75911 302 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 NRASP01111 189 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 TTRP02766 147 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 TK1P04183 234 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 HMGN1P05114 100 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 GYS2P54840 703 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 ZNF684Q5T5D7 378 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 KCTD18Q6PI47 426 aaPredicted RBP13.2□□□□□ -0.3
LIG1-205ENST00000593425 DEGS2Q6QHC5 323 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 ADGRG5Q8IZF4 528 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 ITFG2Q969R8 447 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 CCDC124Q96CT7 223 aaKnown RBP13.2□□□□□ -0.3
LIG1-205ENST00000593425 CITED2Q99967 270 aaPredicted RBP13.2□□□□□ -0.3
LIG1-205ENST00000593425 NRIP2Q9BQI9 281 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 MROQ9BYG7 248 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 YIPF3Q9GZM5 350 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 C1orf21Q9H246 121 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 GPR173Q9NS66 373 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 AURKAIP1Q9NWT8 199 aaPredicted RBP13.2□□□□□ -0.3
LIG1-205ENST00000593425 OR14J1Q9UGF5 321 aa13.2□□□□□ -0.3
LIG1-205ENST00000593425 NUFIP1Q9UHK0 495 aaKnown RBP13.2□□□□□ -0.3
LIG1-205ENST00000593425 DSCAML1Q8TD84 2053 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 hCG_1809904A0A1W2PP81 198 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 A0A1W2PPE2 198 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 A0A1W2PR64 198 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 A0A1W2PRV1 198 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 PQLC2LA1A4F0 135 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 A6NDX4 124 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 C17orf98A8MV24 154 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 ODF3BA8MYP8 253 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 NOS1APO75052 506 aaPredicted RBP13.19□□□□□ -0.3
LIG1-205ENST00000593425 SRSF10O75494 262 aaKnown RBP13.19□□□□□ -0.3
LIG1-205ENST00000593425 NXPH2O95156 264 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 ARG1P05089 322 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 MNAT1P51948 309 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 GNGT1P63211 74 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 ROM1Q03395 351 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 CNN3Q15417 329 aaKnown RBP13.19□□□□□ -0.3
LIG1-205ENST00000593425 TMEM42Q69YG0 159 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 Q6ZS46 218 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 NDUFA11Q86Y39 141 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 ZNF679Q8IYX0 411 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 OR4S1Q8NGB4 309 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 PHF21AQ96BD5 680 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 R3HDM4Q96D70 268 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 ASB9Q96DX5 294 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 CDCA4Q9BXL8 241 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 SLC25A19Q9HC21 320 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 HES4Q9HCC6 221 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 NECAP2Q9NVZ3 263 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms