RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 C1orf146Q5VVC0 180 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 REP15Q6BDI9 236 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 PNCKQ6P2M8 343 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 Q6ZR54 194 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 CMC1Q7Z7K0 106 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 WDFY1Q8IWB7 410 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 LGI3Q8N145 548 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 LRRC52Q8N7C0 313 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 TYMSOSQ8TAI1 123 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 ZPLD1Q8TCW7 415 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 AGAP11Q8TF27 550 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 CASTOR1Q8WTX7 329 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 NEIL2Q969S2 332 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 TLCD1Q96CP7 247 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 TCEAL4Q96EI5 215 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 RILPQ96NA2 401 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 SDHCQ99643 169 aaPredicted RBP3.77□□□□□ -1.81
SMAD4-216ENST00000593223 APOL4Q9BPW4 351 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 SLC35A5Q9BS91 424 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 CXXC4Q9H2H0 198 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 CAB39LQ9H9S4 337 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 UGT1A7Q9HAW7 530 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 BEX1Q9HBH7 125 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 FGF20Q9NP95 211 aaPredicted RBP3.77□□□□□ -1.81
SMAD4-216ENST00000593223 ISYNA1Q9NPH2 558 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.77□□□□□ -1.81
SMAD4-216ENST00000593223 SDHAF2Q9NX18 166 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 CIDEBQ9UHD4 219 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 TMCO1Q9UM00 188 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 SPG11Q96JI7 2443 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 PCNX1Q96RV3 2341 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 AGRNO00468 2067 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF236Q9UL36 1845 aa3.77□□□□□ -1.81
SMAD4-216ENST00000593223 TSPAN11A1L157 253 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 TVP23AA6NH52 213 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF233A6NK53 670 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 EFCAB7A8K855 629 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 C5orf67F2Z3F1 127 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 CCRL2O00421 344 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 TM9SF1O15321 606 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 FGF16O43320 207 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 CDC40O60508 579 aaKnown RBP eCLIP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF354AO60765 605 aaPredicted RBP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 SHOX2O60902 331 aaPredicted RBP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 GATBO75879 557 aaKnown RBP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 DCTN3O75935 186 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 OR7A10O76100 309 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 SEMA4FO95754 770 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 IGSF6O95976 241 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 IFNA21P01568 189 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 BCHEP06276 602 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 C2P06681 752 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 HCKP08631 526 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 LINC00614P0C842 121 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 SLC2A1P11166 492 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 RNH1P13489 461 aaKnown RBP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 GTF2F2P13984 249 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 FUT3P21217 361 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 ATP5A1P25705 553 aaKnown RBP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 RPL34P49207 117 aaKnown RBP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 RANP62826 216 aaKnown RBP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 HMGCS1Q01581 520 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 TAF1AQ15573 450 aaPredicted RBP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 TOMM34Q15785 309 aaPredicted RBP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 UBE2V2Q15819 145 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 TRIM16LQ309B1 348 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 NHLRC3Q5JS37 347 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 DCST2Q5T1A1 773 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 DCAF12Q5T6F0 453 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 CD200R1LQ6Q8B3 271 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 ATRAIDQ6UW56 229 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 NPSR1Q6W5P4 371 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF836Q6ZNA1 936 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 TMEM179Q6ZVK1 233 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 DPPA2Q7Z7J5 298 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 GVQW1Q8N7I0 195 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 ZNRF1Q8ND25 227 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 BEST4Q8NFU0 473 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 OR11L1Q8NGX0 322 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 RASSF5Q8WWW0 418 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 TADA1Q96BN2 335 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 FLYWCH2Q96CP2 140 aaKnown RBP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 TIPINQ9BVW5 301 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 ARL6Q9H0F7 186 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 TLNRD1Q9H1K6 362 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 TPK1Q9H3S4 243 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 DSN1Q9H410 356 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 ELL3Q9HB65 397 aaPredicted RBP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 SLC25A19Q9HC21 320 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 RETNQ9HD89 108 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 ZDHHC4Q9NPG8 344 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 FBXO6Q9NRD1 293 aaPredicted RBP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 HRASLS2Q9NWW9 162 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 GIN1Q9NXP7 522 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 IL17CQ9P0M4 197 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF581Q9P0T4 197 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 PRODH2Q9UF12 536 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 KLHL21Q9UJP4 597 aa3.76□□□□□ -1.81
SMAD4-216ENST00000593223 LSM7Q9UK45 103 aaKnown RBP3.76□□□□□ -1.81
SMAD4-216ENST00000593223 DOCK2Q92608 1830 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms