RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 A0A0G2JK05 382 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 SYNGR1O43759 233 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 FKBP6O75344 327 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 DHRS3O75911 302 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 NRASP01111 189 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 TTRP02766 147 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 HOXB6P17509 224 aaKnown RBP16.66■□□□□ 0.26
TRIM47-207ENST00000593089 HAAOP46952 286 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 CRISP1P54107 249 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 ROM1Q03395 351 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 FLOT2Q14254 428 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 LRRC75BQ2VPJ9 315 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 SMIM21Q3B7S5 101 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 HIST2H2BDQ6DRA6 164 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 Q6ZTK2 550 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 BATF2Q8N1L9 274 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 ASB17Q8WXJ9 295 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 ITFG2Q969R8 447 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 PAPOLBQ9NRJ5 636 aaKnown RBP16.66■□□□□ 0.26
TRIM47-207ENST00000593089 GPR173Q9NS66 373 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 TMEM14AQ9Y6G1 99 aa16.66■□□□□ 0.26
TRIM47-207ENST00000593089 SLC1A7O00341 560 aa16.65■□□□□ 0.26
TRIM47-207ENST00000593089 PRDX2P32119 198 aa16.65■□□□□ 0.26
TRIM47-207ENST00000593089 ESRRGP62508 458 aa16.65■□□□□ 0.26
TRIM47-207ENST00000593089 RPL31P62899 125 aaKnown RBP16.65■□□□□ 0.26
TRIM47-207ENST00000593089 HERPUD1Q15011 391 aa16.65■□□□□ 0.26
TRIM47-207ENST00000593089 TMEM200BQ69YZ2 307 aa16.65■□□□□ 0.26
TRIM47-207ENST00000593089 BCDIN3DQ7Z5W3 292 aaKnown RBP16.65■□□□□ 0.26
TRIM47-207ENST00000593089 ZNF561Q8N587 486 aa16.65■□□□□ 0.26
TRIM47-207ENST00000593089 OR4M1Q8NGD0 313 aa16.65■□□□□ 0.26
TRIM47-207ENST00000593089 CNN2Q99439 309 aaKnown RBP16.65■□□□□ 0.26
TRIM47-207ENST00000593089 MEGF9Q9H1U4 602 aa16.65■□□□□ 0.26
TRIM47-207ENST00000593089 A0A1W2PPH5 198 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 LOC110117498-PIK3R3F6TDL0 507 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 J3QT63 122 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 MAGEB4O15481 346 aaPredicted RBP16.64■□□□□ 0.25
TRIM47-207ENST00000593089 PRKYO43930 277 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 PGA5P0DJD9 388 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 CCL3L1P16619 93 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 COX7A1P24310 79 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 ERVFRD-1P60508 538 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 PTGES3Q15185 160 aaKnown RBP16.64■□□□□ 0.25
TRIM47-207ENST00000593089 CLVS2Q5SYC1 327 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 ZNF573Q86YE8 665 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 C11orf44Q8N8P7 122 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 OR4C13Q8NGP0 309 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 OR2T27Q8NH04 317 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 OR5K1Q8NHB7 308 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 DNAJC9Q8WXX5 260 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 APOL4Q9BPW4 351 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 HEXA-AS1Q9H8Q6 139 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 OR14J1Q9UGF5 321 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 FOXJ3Q9UPW0 622 aa16.64■□□□□ 0.25
TRIM47-207ENST00000593089 A6NIN4 97 aa16.63■□□□□ 0.25
TRIM47-207ENST00000593089 M0R129 80 aa16.63■□□□□ 0.25
TRIM47-207ENST00000593089 SRSF10O75494 262 aaKnown RBP16.63■□□□□ 0.25
TRIM47-207ENST00000593089 NXPH2O95156 264 aa16.63■□□□□ 0.25
TRIM47-207ENST00000593089 KIR2DS4P43632 304 aa16.63■□□□□ 0.25
TRIM47-207ENST00000593089 BMXP51813 675 aa16.63■□□□□ 0.25
TRIM47-207ENST00000593089 EFNB2P52799 333 aa16.63■□□□□ 0.25
TRIM47-207ENST00000593089 CXCR4P61073 352 aa16.63■□□□□ 0.25
TRIM47-207ENST00000593089 BCL2L15Q5TBC7 163 aa16.63■□□□□ 0.25
TRIM47-207ENST00000593089 ZNF322Q6U7Q0 402 aaPredicted RBP16.63■□□□□ 0.25
TRIM47-207ENST00000593089 PLEKHG7Q6ZR37 379 aa16.63■□□□□ 0.25
TRIM47-207ENST00000593089 ASRGL1Q7L266 308 aa16.63■□□□□ 0.25
TRIM47-207ENST00000593089 C11orf42Q8N5U0 333 aa16.63■□□□□ 0.25
TRIM47-207ENST00000593089 USE1Q9NZ43 259 aa16.63■□□□□ 0.25
TRIM47-207ENST00000593089 POLDIP2Q9Y2S7 368 aa16.63■□□□□ 0.25
TRIM47-207ENST00000593089 TCRBV3S1A0A5B6 114 aa16.62■□□□□ 0.25
TRIM47-207ENST00000593089 GYG2O15488 501 aa16.62■□□□□ 0.25
TRIM47-207ENST00000593089 DAPP51397 102 aa16.62■□□□□ 0.25
TRIM47-207ENST00000593089 LGALS4P56470 323 aa16.62■□□□□ 0.25
TRIM47-207ENST00000593089 ZNF273Q14593 569 aa16.62■□□□□ 0.25
TRIM47-207ENST00000593089 FAHD1Q6P587 224 aa16.62■□□□□ 0.25
TRIM47-207ENST00000593089 CRIP3Q6Q6R5 217 aa16.62■□□□□ 0.25
TRIM47-207ENST00000593089 ZNF782Q6ZMW2 699 aaPredicted RBP16.62■□□□□ 0.25
TRIM47-207ENST00000593089 MEPCEQ7L2J0 689 aaKnown RBP16.62■□□□□ 0.25
TRIM47-207ENST00000593089 SLC35F2Q8IXU6 374 aa16.62■□□□□ 0.25
TRIM47-207ENST00000593089 OR2T6Q8NHC8 308 aa16.62■□□□□ 0.25
TRIM47-207ENST00000593089 MOB1AQ9H8S9 216 aa16.62■□□□□ 0.25
TRIM47-207ENST00000593089 RAB18Q9NP72 206 aa16.62■□□□□ 0.25
TRIM47-207ENST00000593089 R4GMQ9 66 aa16.62■□□□□ 0.25
TRIM47-207ENST00000593089 V9GYS6 101 aa16.62■□□□□ 0.25
TRIM47-207ENST00000593089 hCG_1809904A0A1W2PP81 198 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 A0A1W2PPE2 198 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 A0A1W2PR64 198 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 A0A1W2PRV1 198 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 PQLC2LA1A4F0 135 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 DLGAP1O14490 977 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 NOS1APO75052 506 aaPredicted RBP16.61■□□□□ 0.25
TRIM47-207ENST00000593089 PIPP12273 146 aaPredicted RBP16.61■□□□□ 0.25
TRIM47-207ENST00000593089 AANATQ16613 207 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 TMEM42Q69YG0 159 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 ELMOD2Q8IZ81 293 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 KLHDC1Q8N7A1 406 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 OR14K1Q8NGZ2 314 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 NRBF2Q96F24 287 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 NKX3-1Q99801 234 aaPredicted RBP16.61■□□□□ 0.25
TRIM47-207ENST00000593089 NRIP2Q9BQI9 281 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 PRRG3Q9BZD7 231 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms