RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 ZANQ9Y493 2812 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 IGHV1-69-2A0A0G2JMI3 117 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 A0A1B0GTI1 187 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 ANKRD61A6NGH8 418 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 TRIM64A6NGJ6 449 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 TRIM64BA6NI03 449 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 OR4C45A6NMZ5 311 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 CLDN25C9JDP6 229 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 PPIHO43447 177 aaKnown RBP5.41□□□□□ -1.54
VPS4B-205ENST00000591383 GATBO75879 557 aaKnown RBP5.41□□□□□ -1.54
VPS4B-205ENST00000591383 ZFPL1O95159 310 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 TNFAIP8O95379 198 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 PLATP00750 562 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 IGLV3-1P01715 115 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 CSF3P09919 207 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 ZNF12P17014 697 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 CELP19835 753 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 CCL1P22362 96 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 DDOSTP39656 456 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 TGM4P49221 684 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 GPM6AP51674 278 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 CCR9P51686 369 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 CHN2P52757 468 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 GMFBP60983 142 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 TNK1Q13470 666 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 SPHARQ15513 63 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 NEDD8Q15843 81 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 CLEC12BQ2HXU8 276 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 KCTD21Q4G0X4 260 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 SPRNQ5BIV9 151 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 AVPI1Q5T686 147 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 TMEM244Q5VVB8 128 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 LIPKQ5VXJ0 399 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 MZT2BQ6NZ67 158 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 RPL22L1Q6P5R6 122 aaKnown RBP5.41□□□□□ -1.54
VPS4B-205ENST00000591383 ZNF773Q6PK81 442 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 MOB3CQ70IA8 216 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 LRRC75A-AS1Q8N1F1 130 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 NANOGP1Q8N7R0 232 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 BOLLQ8N9W6 283 aaKnown RBP5.41□□□□□ -1.54
VPS4B-205ENST00000591383 HPSE2Q8WWQ2 592 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 NEU4Q8WWR8 484 aaPredicted RBP5.41□□□□□ -1.54
VPS4B-205ENST00000591383 RGP1Q92546 391 aaPredicted RBP5.41□□□□□ -1.54
VPS4B-205ENST00000591383 HIST1H2AAQ96QV6 131 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 FOXC2Q99958 501 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 TMED9Q9BVK6 235 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 CDCA4Q9BXL8 241 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 SLC22A4Q9H015 551 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 CXXC4Q9H2H0 198 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 DUSP21Q9H596 190 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 PPP1R3EQ9H7J1 279 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 ABCB9Q9NP78 766 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 BABAM2Q9NXR7 383 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 PPP1R3CQ9UQK1 317 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 LSM2Q9Y333 95 aaKnown RBP5.41□□□□□ -1.54
VPS4B-205ENST00000591383 CACNG2Q9Y698 323 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 SIRT4Q9Y6E7 314 aaPredicted RBP5.41□□□□□ -1.54
VPS4B-205ENST00000591383 V9GYS6 101 aa5.41□□□□□ -1.54
VPS4B-205ENST00000591383 DYSFO75923 2080 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 IGHV4-30-2A0A087WSY4 118 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 FAM230AA0A1W2PPH8 454 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 LOC390937A0A1W2PQ73 354 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 C9orf118A6NHY6 69 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 DHRS7CA6NNS2 312 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 GMDSO60547 372 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 NRASP01111 189 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 CD2P06729 351 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 CD55P08174 381 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 HCKP08631 526 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 RPSAP08865 295 aaKnown RBP5.4□□□□□ -1.54
VPS4B-205ENST00000591383 IRF2P14316 349 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 ATP6V1B1P15313 513 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 PAX1P15863 534 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 TNFRSF1AP19438 455 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 CD80P33681 288 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 RBMXP38159 391 aaKnown RBP5.4□□□□□ -1.54
VPS4B-205ENST00000591383 CD200P41217 278 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 PPP3R1P63098 170 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 MZT1Q08AG7 82 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 RIN1Q13671 783 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 IRF3Q14653 427 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 MLANAQ16655 118 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 HFEQ30201 348 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 CCDC58Q4VC31 144 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 CLVS2Q5SYC1 327 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 CFAP161Q6P656 301 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 TGIF2LYQ8IUE0 185 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 KRTAP1-3Q8IUG1 177 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 WFDC11Q8NEX6 87 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 OR13C9Q8NGT0 318 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 OR11L1Q8NGX0 322 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 ZNF420Q8TAQ5 688 aaPredicted RBP5.4□□□□□ -1.54
VPS4B-205ENST00000591383 GPR148Q8TDV2 347 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 CCL17Q92583 94 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 RDH5Q92781 318 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 GHSRQ92847 366 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 YIPF5Q969M3 257 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 FGGYQ96C11 551 aa5.4□□□□□ -1.54
VPS4B-205ENST00000591383 ADAT3Q96EY9 351 aaPredicted RBP5.4□□□□□ -1.54
VPS4B-205ENST00000591383 RNF170Q96K19 258 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms