RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 KCNK7Q9Y2U2 307 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 THSD7BQ9C0I4 1608 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 LIMK1P53667 647 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 DVL1P1P54792 670 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 RRADP55042 308 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 RPP30P78346 268 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 TESK1Q15569 626 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 ONECUT2O95948 504 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 ZDHHC23Q8IYP9 409 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 TMEM123Q8N131 208 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 RASL10BQ96S79 203 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 MTCL1Q9Y4B5 1905 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 MED19A0JLT2 244 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 EPOPA6NHQ4 379 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 EIF2S3P41091 472 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 LINC00114Q6XXX2 140 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 IGHV3-64DA0A0J9YX35 117 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 TTLL8A6PVC2 850 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 PATE4P0C8F1 98 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 FUT3P21217 361 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 GPM6AP51674 278 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 TMEM33P57088 247 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 EIF2S3LQ2VIR3 472 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 EXTL1Q92935 676 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 NAA60Q9H7X0 242 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 CASP8AP2Q9UKL3 1982 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 OR2A4O95047 310 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 GRPP07492 148 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 ZNF260Q3ZCT1 412 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 OR56B2PQ8NGI1 322 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 RXFP4Q8TDU9 374 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 OR2A7Q96R45 310 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 CLEC1BQ9P126 229 aa15.13■□□□□ 0.01
SMARCA4-215ENST00000590574 WIPI1Q5MNZ9 446 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 CST9LP1Q5W188 147 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 ZNF561Q8N587 486 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 ZNF519Q8TB69 540 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 ZNF32P17041 273 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 RAB13P51153 203 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 ADIRFQ15847 76 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 WDR74Q6RFH5 385 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 NANPQ8TBE9 248 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 ZNF705GA8MUZ8 300 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 CST7O76096 145 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 ZP4Q12836 540 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 LCN15Q6UWW0 184 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 THNSL2Q86YJ6 484 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 MARVELD3Q96A59 401 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 SHARPINQ9H0F6 387 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 H7C1Q1 480 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 PTAFRP25105 342 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 FAM185AQ8N0U4 392 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 SSX3Q99909 188 aa15.12■□□□□ 0.01
SMARCA4-215ENST00000590574 A0A087WV48 116 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 LRP5LA4QPB2 252 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 E9PQ18 207 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 SIRPB1O00241 398 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 IFNA4P05014 189 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 GFOD1Q9NXC2 390 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 ZNF732B4DXR9 585 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 NPIPB9F8W1W9 429 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 GLAP06280 429 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 IAPPP10997 89 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 DHODHQ02127 395 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 TBC1D28Q2M2D7 210 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 PPP1R35Q8TAP8 253 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 PLEKHA3Q9HB20 300 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 SERPINA7P05543 415 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 CTSDP07339 412 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 GABRA2P47869 451 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 ARF1P84077 181 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 TSPO2Q5TGU0 170 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 SKA3Q8IX90 412 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 AQP7P3A6NL99 342 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 ZNF205O95201 554 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 RAB1AP62820 205 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 DMBX1Q8NFW5 382 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 NPAS1Q99742 590 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 ANXA10Q9UJ72 324 aa15.11■□□□□ 0.01
SMARCA4-215ENST00000590574 ZBTB25P24278 435 aa15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 ZNF239Q16600 458 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 PDZD11Q5EBL8 140 aa15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 SMRP1Q8NCR6 262 aa15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 FLVCR1-AS1Q8TAF5 88 aa15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 AQP3Q92482 292 aa15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 VWCEQ96DN2 955 aa15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 LPAR3Q9UBY5 353 aa15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 TSTD3H0UI37 97 aa15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 PPP1R2P9O14990 202 aa15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 TIMM8AO60220 97 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 WDR1O75083 606 aa15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 RAB31Q13636 194 aa15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 SURF2Q15527 256 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 ASCC3Q8N3C0 2202 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 OR2M5A3KFT3 312 aa15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 ISG15P05161 165 aa15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 LSM6P62312 80 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 SPANXN5Q5MJ07 72 aa15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 SAT2Q96F10 170 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-215ENST00000590574 KCNK17Q96T54 332 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms