RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 AQP3Q92482 292 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 TECTBQ96PL2 329 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 HIST1H2AAQ96QV6 131 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 SLC6A7Q99884 636 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 NUDT16L1Q9BRJ7 211 aaKnown RBP9.28□□□□□ -0.92
SMAD4-211ENST00000590499 ZNF649Q9BS31 505 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 C19orf24Q9BVV8 132 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 SMPD3Q9NY59 655 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-211ENST00000590499 ERVK-18Q9QC07 812 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 GNG8Q9UK08 70 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 PQLC2LA1A4F0 135 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 SNTNA6NMZ2 147 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 DVL1O14640 695 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 AKR7A2O43488 359 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 ENSAO43768 121 aaKnown RBP9.27□□□□□ -0.93
SMAD4-211ENST00000590499 WBP4O75554 376 aaKnown RBP9.27□□□□□ -0.93
SMAD4-211ENST00000590499 PLATP00750 562 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 IGHV4-38-2P0DP08 117 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 TGM4P49221 684 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 OR12D2P58182 307 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 RCN1Q15293 331 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 ODF4Q2M2E3 257 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 ARMCX4Q5H9R4 360 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 CD276Q5ZPR3 534 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 ZNF788Q6ZQV5 615 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 MOB3CQ70IA8 216 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 FAM220AQ7Z4H9 259 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 KCTD20Q7Z5Y7 419 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 FGFRL1Q8N441 504 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 ACBD7Q8N6N7 88 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 FAM216BQ8N7L0 139 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 OR2G2Q8NGZ5 317 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 ANGPTL6Q8NI99 470 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 CCL13Q99616 98 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 DNTTIP1Q9H147 329 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 GPR173Q9NS66 373 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 MRPS18AQ9NVS2 196 aaKnown RBP9.27□□□□□ -0.93
SMAD4-211ENST00000590499 ZNF69Q9UC07 566 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 NUP50Q9UKX7 468 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 MYRFQ9Y2G1 1151 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 PCDHGB1Q9Y5G3 927 aa9.27□□□□□ -0.93
SMAD4-211ENST00000590499 A0A1B0GVI7 797 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 LOC107986453A0A1B0GWG9 222 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 DAPL1A0PJW8 107 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 ANKRD61A6NGH8 418 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 A6NIN4 97 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 J3QT63 122 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 SYT7O43581 403 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 UBCP0CG48 685 aaKnown RBP9.26□□□□□ -0.93
SMAD4-211ENST00000590499 SELLP14151 372 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 MMP9P14780 707 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 MPZP25189 248 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 PEX2P28328 305 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 NANOS3P60323 173 aaKnown RBP9.26□□□□□ -0.93
SMAD4-211ENST00000590499 GMFBP60983 142 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 FGF12P61328 243 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 RAB40BQ12829 278 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 LPCAT4Q643R3 524 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 HAGHLQ6PII5 290 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-211ENST00000590499 C9orf139Q6ZV77 190 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 SLC36A1Q7Z2H8 476 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 BPIFB2Q8N4F0 458 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 PACRGLQ8N7B6 248 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 CCDC54Q8NEL0 328 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 OR5T2Q8NGG2 359 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 ZNF418Q8TF45 676 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-211ENST00000590499 ZFAND2BQ8WV99 257 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 C22orf15Q8WYQ4 148 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 PELI1Q96FA3 418 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 Q96MT0 163 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 GAFA1Q96PS6 74 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 CHST5Q9GZS9 411 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 AMBNQ9NP70 447 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 ESM1Q9NQ30 184 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 C8orf4Q9NR00 106 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 SNTG1Q9NSN8 517 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 DNAJB11Q9UBS4 358 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 ZNF222Q9UK12 451 aa9.26□□□□□ -0.93
SMAD4-211ENST00000590499 IGKV1D-17A0A075B6S4 117 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 TRAV40A0A0B4J280 105 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 OR2AT4A6NND4 320 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 ZNF879B4DU55 563 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 ANKRD65E5RJM6 399 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 H3BSH0 61 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 CASQ2O14958 399 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-211ENST00000590499 SIGLEC5O15389 551 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 SYNGR1O43759 233 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 NOS1APO75052 506 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-211ENST00000590499 ECDO95905 644 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-211ENST00000590499 TFF1P04155 84 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 ISG15P05161 165 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 LIPFP07098 398 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 PGA5P0DJD9 388 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 GLRA1P23415 457 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 HAAOP46952 286 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 CCR9P51686 369 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 ACTA2P62736 377 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 ACTG2P63267 376 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 GALEQ14376 348 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 UBE2V2Q15819 145 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms