RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 IGKV1D-8A0A087WSZ0 117 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 FAM24AA6NFZ4 105 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 ZNF878C9JN71 531 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 SCAND1P57086 179 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 FXYD4P59646 89 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 PSRC1Q6PGN9 363 aaPredicted RBP13.38□□□□□ -0.27
CIRBP-228ENST00000590347 CHRDL2Q6WN34 429 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 C11orf42Q8N5U0 333 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 TSLPQ969D9 159 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 ARRDC3Q96B67 414 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 ZNF764Q96H86 408 aaPredicted RBP13.38□□□□□ -0.27
CIRBP-228ENST00000590347 ABHD6Q9BV23 337 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 C19orf53Q9UNZ5 99 aaPredicted RBP13.38□□□□□ -0.27
CIRBP-228ENST00000590347 POLR3KQ9Y2Y1 108 aaPredicted RBP13.38□□□□□ -0.27
CIRBP-228ENST00000590347 RPS2P15880 293 aaKnown RBP13.38□□□□□ -0.27
CIRBP-228ENST00000590347 TNFSF10P50591 281 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 FGF8P55075 233 aaPredicted RBP13.38□□□□□ -0.27
CIRBP-228ENST00000590347 ICAM4Q14773 271 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 RTP5Q14D33 572 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 MPV17LQ2QL34 196 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 IL22RA2Q969J5 263 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 ADAT3Q96EY9 351 aaPredicted RBP13.38□□□□□ -0.27
CIRBP-228ENST00000590347 HDHD3Q9BSH5 251 aaPredicted RBP13.38□□□□□ -0.27
CIRBP-228ENST00000590347 DEC1Q9P2X7 70 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 MYOTQ9UBF9 498 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 PAM16Q9Y3D7 125 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 OBSL1O75147 1896 aa13.38□□□□□ -0.27
CIRBP-228ENST00000590347 CST7O76096 145 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 AGR2O95994 175 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 SNU13P55769 128 aaKnown RBP13.37□□□□□ -0.27
CIRBP-228ENST00000590347 H3F3AP84243 136 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 PHLDA2Q53GA4 152 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 DCAF10Q5QP82 559 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 SPSB3Q6PJ21 355 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 CDRT4Q8N9R6 151 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 GINS3Q9BRX5 216 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 FUT9Q9Y231 359 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 SLC35G6P0C7Q6 338 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 RAB28P51157 221 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 ERVFC1-1P60608 527 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 SSPNQ14714 243 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 GPHA2Q96T91 129 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 URM1Q9BTM9 101 aaKnown RBP13.37□□□□□ -0.27
CIRBP-228ENST00000590347 RNF24Q9Y225 148 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 RHBDD3Q9Y3P4 386 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 SPACA6W5XKT8 324 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 LAMA1P25391 3075 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 PTPRSQ13332 1948 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 RENP00797 406 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 CISD3P0C7P0 127 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 CTLA4P16410 223 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 ATP6V0CP27449 155 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 GLIPR1L1Q6UWM5 242 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 SLC35E3Q7Z769 313 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 RPP25Q9BUL9 199 aaKnown RBP13.37□□□□□ -0.27
CIRBP-228ENST00000590347 HHLA2Q9UM44 414 aa13.37□□□□□ -0.27
CIRBP-228ENST00000590347 GPR89AB7ZAQ6 455 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 CRTAPO75718 401 aaPredicted RBP13.36□□□□□ -0.27
CIRBP-228ENST00000590347 GAPDHP04406 335 aaKnown RBP13.36□□□□□ -0.27
CIRBP-228ENST00000590347 H2BFMP0C1H6 154 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 SEC11BP0C7V7 166 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 GPR89BP0CG08 455 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 PVRP15151 417 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 AKT2P31751 481 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 OR3A4PP47883 348 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 SEC13P55735 322 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 HLA-DRB3P79483 266 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 CLN3Q13286 438 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 HEBP2Q9Y5Z4 205 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 A0A1W2PPQ1 181 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 GPR137BO60478 399 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 DBHP09172 617 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 TMEM50BP56557 158 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 FMODQ06828 376 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 RSPO4Q2I0M5 234 aaPredicted RBP13.36□□□□□ -0.27
CIRBP-228ENST00000590347 AARDQ4LEZ3 155 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 RSC1A1Q92681 617 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 PCBD2Q9H0N5 130 aa13.36□□□□□ -0.27
CIRBP-228ENST00000590347 ELL3Q9HB65 397 aaPredicted RBP13.36□□□□□ -0.27
CIRBP-228ENST00000590347 CBY3A6NI87 242 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 K7N7A8 449 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 P2RY1P47900 373 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 PSG6Q00889 435 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 GLO1Q04760 184 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 FAM189A2Q15884 450 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 METRNLQ641Q3 311 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 MYPOPQ86VE0 399 aaPredicted RBP13.35□□□□□ -0.27
CIRBP-228ENST00000590347 SLC26A10Q8NG04 563 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 OR10G6Q8NH81 332 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 ZNF2Q9BSG1 426 aaPredicted RBP13.35□□□□□ -0.27
CIRBP-228ENST00000590347 MSL2Q9HCI7 577 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 IGLON5A6NGN9 336 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 HSPA12AO43301 675 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 ANOS1P23352 680 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 ADIRFQ15847 76 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 ZNF74Q16587 644 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 MEX3BQ6ZN04 569 aaKnown RBP13.35□□□□□ -0.27
CIRBP-228ENST00000590347 ZNF385AQ96PM9 386 aaKnown RBP13.35□□□□□ -0.27
CIRBP-228ENST00000590347 TBX15Q96SF7 602 aa13.35□□□□□ -0.27
CIRBP-228ENST00000590347 ACTR3CQ9C0K3 210 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms