RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 SEZ6L2Q6UXD5 910 aa12.81□□□□□ -0.36
RETREG3-208ENST00000589797 SCMH1Q96GD3 660 aa12.81□□□□□ -0.36
RETREG3-208ENST00000589797 WDR13Q9H1Z4 485 aa12.81□□□□□ -0.36
RETREG3-208ENST00000589797 RPS16P62249 146 aaKnown RBP12.81□□□□□ -0.36
RETREG3-208ENST00000589797 ZDHHC23Q8IYP9 409 aa12.81□□□□□ -0.36
RETREG3-208ENST00000589797 ARL11Q969Q4 196 aa12.81□□□□□ -0.36
RETREG3-208ENST00000589797 FAM131CQ96AQ9 280 aa12.81□□□□□ -0.36
RETREG3-208ENST00000589797 SDSLQ96GA7 329 aa12.81□□□□□ -0.36
RETREG3-208ENST00000589797 ZNF488Q96MN9 340 aa12.81□□□□□ -0.36
RETREG3-208ENST00000589797 LRP3O75074 770 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 GSTP1P09211 210 aaKnown RBP12.8□□□□□ -0.36
RETREG3-208ENST00000589797 FOXC1Q12948 553 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 OR8G1Q15617 311 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 LGALSLQ3ZCW2 172 aaPredicted RBP12.8□□□□□ -0.36
RETREG3-208ENST00000589797 DCAF12L2Q5VW00 463 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 TMEM268Q5VZI3 342 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 OR2M7Q8NG81 312 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 ZNF285Q96NJ3 590 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 GPHA2Q96T91 129 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 SRXN1Q9BYN0 137 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 RGCCQ9H4X1 137 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 CLDN16Q9Y5I7 305 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 TANC1Q9C0D5 1861 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 THBS4P35443 961 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 ZNF133P52736 654 aaPredicted RBP12.8□□□□□ -0.36
RETREG3-208ENST00000589797 KRBOX4Q5JUW0 171 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 ADAD2Q8NCV1 583 aaKnown RBP12.8□□□□□ -0.36
RETREG3-208ENST00000589797 OR11H4Q8NGC9 324 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 FBXW5Q969U6 566 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 UQCC2Q9BRT2 126 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 GBF1Q92538 1859 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 VSTM5A8MXK1 200 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 H7C2Y5 167 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 EFNA2O43921 213 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 TGM6O95932 706 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 HPP00738 406 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 VSIG10L2P0DP72 767 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 NFYBP25208 207 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 TIPARPQ7Z3E1 657 aaKnown RBP12.8□□□□□ -0.36
RETREG3-208ENST00000589797 C17orf78Q8N4C9 275 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 EXTL1Q92935 676 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 RBPMSQ93062 196 aaKnown RBP12.8□□□□□ -0.36
RETREG3-208ENST00000589797 ARPC5LQ9BPX5 153 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 GHITMQ9H3K2 345 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 SDHAF2Q9NX18 166 aa12.8□□□□□ -0.36
RETREG3-208ENST00000589797 CHCHD2Q9Y6H1 151 aaPredicted RBP12.8□□□□□ -0.36
RETREG3-208ENST00000589797 FAM208BQ5VWN6 2430 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 TRBV5-5A0A0J9YX44 114 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 SP9P0CG40 484 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 IRF2P14316 349 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 SNAI3Q3KNW1 292 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 NFAM1Q8NET5 270 aaPredicted RBP12.79□□□□□ -0.36
RETREG3-208ENST00000589797 POC1BQ8TC44 478 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 TREM2Q9NZC2 230 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 SULT1C2O00338 296 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 IFITM2Q01629 132 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 TMEM128Q5BJH2 165 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 ZNF709Q8N972 641 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 LRRC75AQ8NAA5 344 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 ZNF485Q8NCK3 441 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 FAM213BQ8TBF2 198 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 ZNF629Q9UEG4 869 aaPredicted RBP12.79□□□□□ -0.36
RETREG3-208ENST00000589797 KIF26AQ9ULI4 1882 aaPredicted RBP12.79□□□□□ -0.36
RETREG3-208ENST00000589797 AGFG2O95081 481 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 UMODP07911 640 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 PSG4Q00888 419 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 ROM1Q03395 351 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 PRDX4Q13162 271 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 COL19A1Q14993 1142 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 MICBQ29980 383 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 ZNF626Q68DY1 528 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 TFAP2EQ6VUC0 442 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 SSX9Q7RTT3 188 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 TMEM251Q8N6I4 163 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 ADPRHL1Q8NDY3 354 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 PXT1Q8NFP0 134 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 HGDQ93099 445 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 ZNF75AQ96N20 296 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 GPR160Q9UJ42 338 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 KLK13Q9UKR3 277 aa12.79□□□□□ -0.36
RETREG3-208ENST00000589797 TMEM200CA6NKL6 621 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 BMP5P22003 454 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 TUBG1P23258 451 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 GSK3AP49840 483 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 PPP1R32Q7Z5V6 425 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 SKA3Q8IX90 412 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 OR13C8Q8NGS7 320 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 OR8U1Q8NH10 309 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 FANCFQ9NPI8 374 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 PRELID1Q9Y255 219 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 LRRK1Q38SD2 2015 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 LIMK1P53667 647 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 LHFPL2Q6ZUX7 228 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 OR10AD1Q8NGE0 317 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 OR10J5Q8NHC4 309 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 SIGLEC12Q96PQ1 595 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 GPR35Q9HC97 309 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 IL2RAP01589 272 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 FUT6P51993 359 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 AKR1C8PQ5T2L2 129 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms