RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 CYB5R3P00387 301 aaPredicted RBP12.8□□□□□ -0.36
ATG4D-211ENST00000589753 TMEM225BP0DP42 221 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 CD37P11049 281 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 OR3A4PP47883 348 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 SERPINB10P48595 397 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 OR10A3P58181 314 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 MXD1Q05195 221 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 SLC25A26Q70HW3 274 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 LYPD6Q86Y78 171 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 MKXQ8IYA7 352 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 LRRC75A-AS1Q8N1F1 130 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 OR10Z1Q8NGY1 313 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 OR51F2Q8NH61 342 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 LRRC29Q8WV35 223 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 ISOC1Q96CN7 298 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 RBM38Q9H0Z9 239 aaKnown RBP12.8□□□□□ -0.36
ATG4D-211ENST00000589753 CNTD2Q9H8S5 307 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 RNF7Q9UBF6 113 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 SMIM31A0A1B0GVY4 71 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 SMIM30A4D0T7 59 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 DPPA5A6NC42 116 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 ANGPTL7O43827 346 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 RP2O75695 350 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 IL1AP01583 271 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 CLEC2LP0C7M8 214 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 CFHR2P36980 270 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 RBMXP38159 391 aaKnown RBP12.79□□□□□ -0.36
ATG4D-211ENST00000589753 PTGFRP43088 359 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 HNRNPA0Q13151 305 aaKnown RBP12.79□□□□□ -0.36
ATG4D-211ENST00000589753 RIN1Q13671 783 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 CARTPTQ16568 116 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 C1orf100Q5SVJ3 147 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 USP43Q70EL4 1123 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 NR2C2APQ86WQ0 139 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 SAXO1Q8IYX7 474 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 C1orf87Q8N0U7 546 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 ZSCAN4Q8NAM6 433 aaPredicted RBP12.79□□□□□ -0.36
ATG4D-211ENST00000589753 OR6M1Q8NGM8 313 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 SLAMF9Q96A28 289 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 S100A13Q99584 98 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 CHODLQ9H9P2 273 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 PLGRKTQ9HBL7 147 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 DCAF16Q9NXF7 216 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 NDUFA13Q9P0J0 144 aa12.79□□□□□ -0.36
ATG4D-211ENST00000589753 MRPS28Q9Y2Q9 187 aaKnown RBP12.79□□□□□ -0.36
ATG4D-211ENST00000589753 TANC2Q9HCD6 1990 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 A0A0G2JK05 382 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 NOTOA8MTQ0 251 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 TMEM178BH3BS89 294 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 SLC17A2O00624 439 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 SLC22A1O15245 554 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 AKR7A2O43488 359 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 LHBP01229 141 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 ACAA1P09110 424 aaPredicted RBP12.78□□□□□ -0.36
ATG4D-211ENST00000589753 PGA5P0DJD9 388 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 HTR2CP28335 458 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 RPS19P39019 145 aaKnown RBP12.78□□□□□ -0.36
ATG4D-211ENST00000589753 AWAT2Q6E213 333 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 GCSAMQ8N6F7 178 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 ZNF525Q8N782 197 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 POC1AQ8NBT0 407 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 PXT1Q8NFP0 134 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 OR4D6Q8NGJ1 314 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 NDNFQ8TB73 568 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 CEP19Q96LK0 163 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 SMURF1Q9HCE7 757 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 MTCH1Q9NZJ7 389 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 RSL24D1Q9UHA3 163 aaKnown RBP12.78□□□□□ -0.36
ATG4D-211ENST00000589753 ING4Q9UNL4 249 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 HECTD1Q9ULT8 2610 aa12.78□□□□□ -0.36
ATG4D-211ENST00000589753 CHD3Q12873 2000 aaKnown RBP12.78□□□□□ -0.36
ATG4D-211ENST00000589753 DYSFO75923 2080 aa12.77□□□□□ -0.36
ATG4D-211ENST00000589753 IGKV1-12A0A0C4DH73 117 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 IFITM5A6NNB3 132 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 SRRM5B3KS81 715 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 CLDN25C9JDP6 229 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 H3BMQ9 156 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 TRAPPC2LH3BP13 241 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 NOS1APO75052 506 aaPredicted RBP12.77□□□□□ -0.37
ATG4D-211ENST00000589753 KDM4BO94953 1096 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 IGKV1D-12P01611 117 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 CSF3P09919 207 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 EGR1P18146 543 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 BCL3P20749 454 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 PDLIM4P50479 330 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 CAV3P56539 151 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 TMEM33P57088 247 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 SPCS2Q15005 226 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 RAB11BQ15907 218 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 HES5Q5TA89 166 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 FAM166AQ6J272 317 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 SFXN4Q6P4A7 337 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 GLIPR1L1Q6UWM5 242 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 ASCL4Q6XD76 172 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 C1QL2Q7Z5L3 287 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 PEG10Q86TG7 708 aaKnown RBP12.77□□□□□ -0.37
ATG4D-211ENST00000589753 Q8IYB0 196 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 BATF2Q8N1L9 274 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 BOLLQ8N9W6 283 aaKnown RBP12.77□□□□□ -0.37
ATG4D-211ENST00000589753 C12orf43Q96C57 262 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms