RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 SPERTQ8NA61 448 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 ZSCAN4Q8NAM6 433 aaPredicted RBP18.98■□□□□ 0.63
ATG4D-209ENST00000588857 PXT1Q8NFP0 134 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 OR4M2Q8NGB6 313 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 OR51F2Q8NH61 342 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 TMEM59Q9BXS4 323 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 MRPL37Q9BZE1 423 aaKnown RBP18.98■□□□□ 0.63
ATG4D-209ENST00000588857 SRRQ9GZT4 340 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 PCDHB16Q9NRJ7 776 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 SHISA9B4DS77 424 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 H0YL77 283 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 MLNRO43193 412 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 CDC14BO60729 498 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 ZNF780AO75290 641 aaPredicted RBP18.97■□□□□ 0.63
ATG4D-209ENST00000588857 KDM4BO94953 1096 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 CSTBP04080 98 aaKnown RBP18.97■□□□□ 0.63
ATG4D-209ENST00000588857 SERPINA2P20848 420 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 ASCL4Q6XD76 172 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 Q6ZR03 302 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 MKXQ8IYA7 352 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 IZUMO1Q8IYV9 350 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 GDPD1Q8N9F7 314 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 TMEM104Q8NE00 496 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 OR10AD1Q8NGE0 317 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 OR10K1Q8NGX5 313 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 GAL3ST1Q99999 423 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 BANF2Q9H503 90 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 PALMDQ9NP74 551 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 C14orf119Q9NWQ9 140 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 RNF115Q9Y4L5 304 aa18.97■□□□□ 0.63
ATG4D-209ENST00000588857 XRCC3O43542 346 aa18.96■□□□□ 0.63
ATG4D-209ENST00000588857 MZT1Q08AG7 82 aa18.96■□□□□ 0.63
ATG4D-209ENST00000588857 HAGHLQ6PII5 290 aaPredicted RBP18.96■□□□□ 0.63
ATG4D-209ENST00000588857 CDH24Q86UP0 819 aa18.96■□□□□ 0.63
ATG4D-209ENST00000588857 DMRTC2Q8IXT2 367 aaPredicted RBP18.96■□□□□ 0.63
ATG4D-209ENST00000588857 SAXO1Q8IYX7 474 aa18.96■□□□□ 0.63
ATG4D-209ENST00000588857 URM1Q9BTM9 101 aaKnown RBP18.96■□□□□ 0.63
ATG4D-209ENST00000588857 CCDC32Q9BV29 185 aa18.96■□□□□ 0.63
ATG4D-209ENST00000588857 CXXC4Q9H2H0 198 aa18.96■□□□□ 0.63
ATG4D-209ENST00000588857 OR51I2Q9H344 312 aa18.96■□□□□ 0.63
ATG4D-209ENST00000588857 PLK3Q9H4B4 646 aa18.96■□□□□ 0.63
ATG4D-209ENST00000588857 TAAR3PQ9P1P4 343 aa18.96■□□□□ 0.63
ATG4D-209ENST00000588857 LRP5LA4QPB2 252 aa18.95■□□□□ 0.62
ATG4D-209ENST00000588857 TMEM210A6NLX4 147 aa18.95■□□□□ 0.62
ATG4D-209ENST00000588857 HTR3BO95264 441 aa18.95■□□□□ 0.62
ATG4D-209ENST00000588857 OR4A8P0C604 315 aa18.95■□□□□ 0.62
ATG4D-209ENST00000588857 MGMTP16455 207 aa18.95■□□□□ 0.62
ATG4D-209ENST00000588857 ADIPOQQ15848 244 aa18.95■□□□□ 0.62
ATG4D-209ENST00000588857 NKPD1Q17RQ9 610 aa18.95■□□□□ 0.62
ATG4D-209ENST00000588857 OR8H2Q8N162 312 aa18.95■□□□□ 0.62
ATG4D-209ENST00000588857 OR2Z1Q8NG97 314 aa18.95■□□□□ 0.62
ATG4D-209ENST00000588857 C15orf40Q8WUR7 153 aa18.95■□□□□ 0.62
ATG4D-209ENST00000588857 IL36GQ9NZH8 169 aa18.95■□□□□ 0.62
ATG4D-209ENST00000588857 ROS1P08922 2347 aa18.95■□□□□ 0.62
ATG4D-209ENST00000588857 A0A0A6YYH2 397 aa18.94■□□□□ 0.62
ATG4D-209ENST00000588857 A0A1B0GWJ7 208 aa18.94■□□□□ 0.62
ATG4D-209ENST00000588857 A0A1W2PP11 408 aa18.94■□□□□ 0.62
ATG4D-209ENST00000588857 A6NJ64 397 aa18.94■□□□□ 0.62
ATG4D-209ENST00000588857 F5H5P2 479 aa18.94■□□□□ 0.62
ATG4D-209ENST00000588857 SCGNO76038 276 aa18.94■□□□□ 0.62
ATG4D-209ENST00000588857 FAM76BQ5HYJ3 339 aa18.94■□□□□ 0.62
ATG4D-209ENST00000588857 RAB12Q6IQ22 244 aa18.94■□□□□ 0.62
ATG4D-209ENST00000588857 BIVMQ86UB2 503 aa18.94■□□□□ 0.62
ATG4D-209ENST00000588857 PIK3IP1Q96FE7 263 aa18.94■□□□□ 0.62
ATG4D-209ENST00000588857 ABHD1Q96SE0 405 aa18.94■□□□□ 0.62
ATG4D-209ENST00000588857 SDHCQ99643 169 aaPredicted RBP18.94■□□□□ 0.62
ATG4D-209ENST00000588857 PKIBQ9C010 78 aa18.94■□□□□ 0.62
ATG4D-209ENST00000588857 IGKV1-12A0A0C4DH73 117 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 UPK1BO75841 260 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 TPPPO94811 219 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 IGKV1D-12P01611 117 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 GTF2F2P13984 249 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 TAS2R20P59543 309 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 RPS27AP62979 156 aaKnown RBP18.93■□□□□ 0.62
ATG4D-209ENST00000588857 HIST2H2BCQ6DN03 193 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 TMEM200AQ86VY9 491 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 Q8N402 240 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 ACBD4Q8NC06 268 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 SLAMF9Q96A28 289 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 SELENOIQ9C0D9 397 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 LPAR5Q9H1C0 372 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 ABCB10Q9NRK6 738 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 UTP20O75691 2785 aaKnown RBP18.93■□□□□ 0.62
ATG4D-209ENST00000588857 TRAV18A0A075B6X5 111 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 ZSCAN5BA6NJL1 495 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 DEFB108AA8MXU0 73 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 E7EQL1 145 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 TRAPPC2LH3BP13 241 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 J3QT63 122 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 SIAH2O43255 324 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 GRPP07492 148 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 SERPINF1P36955 418 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 IL24Q13007 206 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 ZNF181Q2M3W8 571 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 WDR86Q86TI4 376 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 SNX29P2Q8IUI4 249 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 OR51T1Q8NGJ9 327 aa18.93■□□□□ 0.62
ATG4D-209ENST00000588857 CYSRT1A8MQ03 144 aa18.92■□□□□ 0.62
ATG4D-209ENST00000588857 CHRM2P08172 466 aa18.92■□□□□ 0.62
ATG4D-209ENST00000588857 MPZP25189 248 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms