RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 THBS3P49746 956 aa17.37■□□□□ 0.37
CAPNS1-205ENST00000588780 EDDM3BP56851 147 aa17.37■□□□□ 0.37
CAPNS1-205ENST00000588780 ETV3LQ6ZN32 361 aa17.37■□□□□ 0.37
CAPNS1-205ENST00000588780 ERI1Q8IV48 349 aaKnown RBP17.37■□□□□ 0.37
CAPNS1-205ENST00000588780 RNF133Q8WVZ7 376 aa17.37■□□□□ 0.37
CAPNS1-205ENST00000588780 AQP3Q92482 292 aa17.37■□□□□ 0.37
CAPNS1-205ENST00000588780 DHRS1Q96LJ7 313 aa17.37■□□□□ 0.37
CAPNS1-205ENST00000588780 PRR25Q96S07 402 aa17.37■□□□□ 0.37
CAPNS1-205ENST00000588780 SAR1AQ9NR31 198 aa17.37■□□□□ 0.37
CAPNS1-205ENST00000588780 NME4O00746 187 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 TK1P04183 234 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 IGHV1-8P0DP01 117 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 LYL1P12980 280 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 SPI1P17947 270 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 GSSP48637 474 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 ACTA2P62736 377 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 ACTG2P63267 376 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 ACTC1P68032 377 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 ACTA1P68133 377 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 TSPAN31Q12999 210 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 IL18R1Q13478 541 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 CRMP1Q14194 572 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 MINOS1Q5TGZ0 78 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 MOB3CQ70IA8 216 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 BATF2Q8N1L9 274 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 ASCC1Q8N9N2 400 aaKnown RBP17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 C7orf34Q96L11 122 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 ATP6V1G3Q96LB4 118 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 SLC25A33Q9BSK2 321 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 LIN7BQ9HAP6 207 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 CDH10Q9Y6N8 788 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 MINOS1-NBL1R4GNA1 71 aa17.36■□□□□ 0.37
CAPNS1-205ENST00000588780 PSMB11A5LHX3 300 aa17.35■□□□□ 0.37
CAPNS1-205ENST00000588780 NXPH2O95156 264 aa17.35■□□□□ 0.37
CAPNS1-205ENST00000588780 CLUP10909 449 aa17.35■□□□□ 0.37
CAPNS1-205ENST00000588780 BLVRAP53004 296 aa17.35■□□□□ 0.37
CAPNS1-205ENST00000588780 DLX6P56179 175 aa17.35■□□□□ 0.37
CAPNS1-205ENST00000588780 CEACAM21Q3KPI0 293 aa17.35■□□□□ 0.37
CAPNS1-205ENST00000588780 RPL13AP3Q6NVV1 102 aa17.35■□□□□ 0.37
CAPNS1-205ENST00000588780 C8orf86Q6ZUL3 223 aa17.35■□□□□ 0.37
CAPNS1-205ENST00000588780 INTS14Q96SY0 518 aa17.35■□□□□ 0.37
CAPNS1-205ENST00000588780 VIPAS39Q9H9C1 493 aa17.35■□□□□ 0.37
CAPNS1-205ENST00000588780 SAMD4AQ9UPU9 718 aaKnown RBP17.35■□□□□ 0.37
CAPNS1-205ENST00000588780 LCE6AA0A183 80 aa17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 FAM90A22PA8MWA6 464 aa17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 GMNNO75496 209 aa17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 DNAJC8O75937 253 aaPredicted RBP17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 BRS3P32247 399 aa17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 MAP2K3P46734 347 aa17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 PLCXD3Q63HM9 321 aa17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 MEPCEQ7L2J0 689 aaKnown RBP17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 ZNF329Q86UD4 541 aa17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 COMMD2Q86X83 199 aa17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 OSR2Q8N2R0 312 aa17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 ZNF676Q8N7Q3 588 aa17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 POC1AQ8NBT0 407 aa17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 OTULINQ96BN8 352 aa17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 TBC1D23Q9NUY8 699 aa17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 LSM4Q9Y4Z0 139 aaKnown RBP17.34■□□□□ 0.37
CAPNS1-205ENST00000588780 OR5B21A6NL26 309 aa17.33■□□□□ 0.36
CAPNS1-205ENST00000588780 PGA5P0DJD9 388 aa17.33■□□□□ 0.36
CAPNS1-205ENST00000588780 MYCNOSP40205 109 aa17.33■□□□□ 0.36
CAPNS1-205ENST00000588780 OPRL1P41146 370 aa17.33■□□□□ 0.36
CAPNS1-205ENST00000588780 RPL23AP62750 156 aaKnown RBP17.33■□□□□ 0.36
CAPNS1-205ENST00000588780 GDPD3Q7L5L3 318 aa17.33■□□□□ 0.36
CAPNS1-205ENST00000588780 OR5A2Q8NGI9 324 aa17.33■□□□□ 0.36
CAPNS1-205ENST00000588780 ZNF714Q96N38 554 aa17.33■□□□□ 0.36
CAPNS1-205ENST00000588780 AMELYQ99218 206 aa17.33■□□□□ 0.36
CAPNS1-205ENST00000588780 DYNC2H1Q8NCM8 4307 aaKnown RBP17.33■□□□□ 0.36
CAPNS1-205ENST00000588780 RBP4P02753 201 aa17.32■□□□□ 0.36
CAPNS1-205ENST00000588780 HTR1DP28221 377 aa17.32■□□□□ 0.36
CAPNS1-205ENST00000588780 ECI1P42126 302 aa17.32■□□□□ 0.36
CAPNS1-205ENST00000588780 ARHGDIBP52566 201 aa17.32■□□□□ 0.36
CAPNS1-205ENST00000588780 GLYATQ6IB77 296 aa17.32■□□□□ 0.36
CAPNS1-205ENST00000588780 SHFQ7M4L6 423 aa17.32■□□□□ 0.36
CAPNS1-205ENST00000588780 KLHL30-AS1Q8NEE0 82 aa17.32■□□□□ 0.36
CAPNS1-205ENST00000588780 RP9Q8TA86 221 aaKnown RBP17.32■□□□□ 0.36
CAPNS1-205ENST00000588780 OR8B4Q96RC9 309 aa17.32■□□□□ 0.36
CAPNS1-205ENST00000588780 HOPXQ9BPY8 73 aaPredicted RBP17.32■□□□□ 0.36
CAPNS1-205ENST00000588780 IGHV2-26A0A0B4J1V2 119 aa17.31■□□□□ 0.36
CAPNS1-205ENST00000588780 GSTT1P30711 240 aa17.31■□□□□ 0.36
CAPNS1-205ENST00000588780 RRM2P31350 389 aa17.31■□□□□ 0.36
CAPNS1-205ENST00000588780 HAAOP46952 286 aa17.31■□□□□ 0.36
CAPNS1-205ENST00000588780 C18orf65Q6ZTR6 163 aa17.31■□□□□ 0.36
CAPNS1-205ENST00000588780 OR2W3Q7Z3T1 314 aa17.31■□□□□ 0.36
CAPNS1-205ENST00000588780 OR8B12Q8NGG6 310 aa17.31■□□□□ 0.36
CAPNS1-205ENST00000588780 THEM6Q8WUY1 208 aa17.31■□□□□ 0.36
CAPNS1-205ENST00000588780 MCUR1Q96AQ8 359 aa17.31■□□□□ 0.36
CAPNS1-205ENST00000588780 DUX3Q96PT4 197 aa17.31■□□□□ 0.36
CAPNS1-205ENST00000588780 TSSK6Q9BXA6 273 aa17.31■□□□□ 0.36
CAPNS1-205ENST00000588780 CLEC7AQ9BXN2 247 aa17.31■□□□□ 0.36
CAPNS1-205ENST00000588780 DCAF13Q9NV06 445 aaKnown RBP17.31■□□□□ 0.36
CAPNS1-205ENST00000588780 VNN3Q9NY84 501 aa17.31■□□□□ 0.36
CAPNS1-205ENST00000588780 NDUFAB1O14561 156 aa17.3■□□□□ 0.36
CAPNS1-205ENST00000588780 GSC2O15499 205 aa17.3■□□□□ 0.36
CAPNS1-205ENST00000588780 OR2F2O95006 317 aa17.3■□□□□ 0.36
CAPNS1-205ENST00000588780 IFNGP01579 166 aa17.3■□□□□ 0.36
CAPNS1-205ENST00000588780 LUMP51884 338 aaPredicted RBP17.3■□□□□ 0.36
CAPNS1-205ENST00000588780 GP2P55259 537 aaKnown RBP17.3■□□□□ 0.36
CAPNS1-205ENST00000588780 EDDM3AQ14507 147 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms