RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 ZNF181Q2M3W8 571 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 RFX4Q33E94 735 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 DEFB121Q5J5C9 76 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 FOXB2Q5VYV0 432 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 COLCA1Q6ZS62 124 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 LHFPL2Q6ZUX7 228 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 RRM2BQ7LG56 351 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 TMEM219Q86XT9 240 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 C11orf53Q8IXP5 236 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 FAM86B1Q8N7N1 296 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 GJC3Q8NFK1 279 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 SLC26A10Q8NG04 563 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 OR2T12Q8NG77 320 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 OR9Q1Q8NGQ5 310 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 OR10Z1Q8NGY1 313 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 OR2AJ1Q8NGZ0 328 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 ANGPTL6Q8NI99 470 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 IL17DQ8TAD2 202 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 FANK1Q8TC84 345 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 FNDC8Q8TC99 324 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 SLC7A13Q8TCU3 470 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 ACOT11Q8WXI4 607 aaPredicted RBP4.53□□□□□ -1.68
CHUK-203ENST00000588656 RFKQ969G6 155 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 RCN3Q96D15 328 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 R3HDM4Q96D70 268 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 ZNF799Q96GE5 643 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 CLPTM1LQ96KA5 538 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 SSX3Q99909 188 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 SPXQ9BT56 116 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 C16orf95Q9H693 158 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 NRIP3Q9NQ35 241 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 CENPMQ9NSP4 180 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 MRPL22Q9NWU5 206 aaKnown RBP4.53□□□□□ -1.68
CHUK-203ENST00000588656 CMTM6Q9NX76 183 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 GAR1Q9NY12 217 aaKnown RBP4.53□□□□□ -1.68
CHUK-203ENST00000588656 ZNF391Q9UJN7 358 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 B9D1Q9UPM9 204 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 SIGLEC7Q9Y286 467 aa4.53□□□□□ -1.68
CHUK-203ENST00000588656 FAM32AQ9Y421 112 aaKnown RBP4.53□□□□□ -1.68
CHUK-203ENST00000588656 A0A1B0GVI7 797 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 WI2-2373I1.2A0A1W2PRP0 233 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 OR6C68A6NDL8 312 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.52□□□□□ -1.69
CHUK-203ENST00000588656 K7EIL1 84 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 CXCR6O00574 342 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 BHLHE40O14503 412 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 CDIPTO14735 213 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 GSTA4O15217 222 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 PFDN1O60925 122 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 PTP4A3O75365 173 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 RENP00797 406 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 IGF2P01344 180 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 GLAP06280 429 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 LIPFP07098 398 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 SPARCP09486 303 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 CLUP10909 449 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 EEF1B2P24534 225 aaKnown RBP4.52□□□□□ -1.69
CHUK-203ENST00000588656 HOXD3P31249 432 aaPredicted RBP4.52□□□□□ -1.69
CHUK-203ENST00000588656 IFNA8P32881 189 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 MSX2P35548 267 aaPredicted RBP4.52□□□□□ -1.69
CHUK-203ENST00000588656 TGFBR2P37173 567 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 GABRA2P47869 451 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 OMPP47874 163 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 CEBPDP49716 269 aaPredicted RBP4.52□□□□□ -1.69
CHUK-203ENST00000588656 EFNB2P52799 333 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 HIST1H3AP68431 136 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 DGUOKQ16854 277 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 KRTAP27-1Q3LI81 207 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 IFI44LQ53G44 452 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 VAX1Q5SQQ9 334 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 CLVS2Q5SYC1 327 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 KPRPQ5T749 579 aaPredicted RBP4.52□□□□□ -1.69
CHUK-203ENST00000588656 HIST2H3PS2Q5TEC6 136 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 HCP5Q6MZN7 132 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 ZNF782Q6ZMW2 699 aaPredicted RBP4.52□□□□□ -1.69
CHUK-203ENST00000588656 HIST2H3AQ71DI3 136 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 DPY19L4Q7Z388 723 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 DCXRQ7Z4W1 244 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 LHFPL4Q7Z7J7 247 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 MKXQ8IYA7 352 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 FAM185AQ8N0U4 392 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 OR8J3Q8NGG0 315 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 OR51G2Q8NGK0 314 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 OR8S1Q8NH09 359 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 LRTOMTQ8WZ04 291 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 RPL3LQ92901 407 aaKnown RBP4.52□□□□□ -1.69
CHUK-203ENST00000588656 TNFRSF14Q92956 283 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 FAM162AQ96A26 154 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 OPALINQ96PE5 141 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 COPS4Q9BT78 406 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 IFT27Q9BW83 186 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 POLR2J2Q9GZM3 115 aaKnown RBP4.52□□□□□ -1.69
CHUK-203ENST00000588656 NDEL1Q9GZM8 345 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 POLR2J3Q9H1A7 115 aaKnown RBP4.52□□□□□ -1.69
CHUK-203ENST00000588656 OR52D1Q9H346 318 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 EGLN3Q9H6Z9 239 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 SPACA1Q9HBV2 294 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 VCX3AQ9NNX9 186 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 TRIM36Q9NQ86 728 aa4.52□□□□□ -1.69
CHUK-203ENST00000588656 INTS9Q9NV88 658 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms