RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 SPSB2Q99619 263 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 PHF7Q9BWX1 381 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-206ENST00000587730 FBXL17Q9UF56 701 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 FAHP16930 419 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 NME2P22392 152 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 SHBQ15464 509 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 RPUSD3Q6P087 351 aaKnown RBP16.26■□□□□ 0.19
DDX39A-206ENST00000587730 C1QL2Q7Z5L3 287 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 BHLHE23Q8NDY6 225 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 OR5D18Q8NGL1 313 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 SLC39A7Q92504 469 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 TMEM231Q9H6L2 316 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 WDR54Q9H977 334 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 STRAPQ9Y3F4 350 aaKnown RBP16.26■□□□□ 0.19
DDX39A-206ENST00000587730 ADAMTS20P59510 1910 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 GJE1A6NN92 205 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 OR5H8P0DN80 308 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 TMEM33P57088 247 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 MRPS34P82930 218 aaKnown RBP16.25■□□□□ 0.19
DDX39A-206ENST00000587730 RNF212Q495C1 297 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 ABCA11PQ4W5N1 156 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 GGNBP1Q5YKI7 109 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 MAML2Q8IZL2 1156 aaPredicted RBP16.25■□□□□ 0.19
DDX39A-206ENST00000587730 NABP1Q96AH0 204 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 SYT3Q9BQG1 590 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 PIGQQ9BRB3 760 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 ANGPTL4Q9BY76 406 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 EGLN1Q9GZT9 426 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 TUBA4BQ9H853 241 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 LUZP4Q9P127 313 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 ATPIF1Q9UII2 106 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 TIMM10BQ9Y5J6 103 aa16.25■□□□□ 0.19
DDX39A-206ENST00000587730 CHCHD2Q9Y6H1 151 aaPredicted RBP16.25■□□□□ 0.19
DDX39A-206ENST00000587730 TSPAN15O95858 294 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 IL13RA2Q14627 380 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 RAB35Q15286 201 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 FAM27BQ5VT28 67 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 Q6ZRG5 221 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 GALNTL5Q7Z4T8 443 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 TMEM123Q8N131 208 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 LIN37Q96GY3 246 aaPredicted RBP16.24■□□□□ 0.19
DDX39A-206ENST00000587730 ADAT1Q9BUB4 502 aaKnown RBP16.24■□□□□ 0.19
DDX39A-206ENST00000587730 NAA60Q9H7X0 242 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 PRR13Q9NZ81 148 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 MCTS1Q9ULC4 181 aaKnown RBP16.24■□□□□ 0.19
DDX39A-206ENST00000587730 STARD10Q9Y365 291 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 FAM96BQ9Y3D0 163 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 SEC16AO15027 2179 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 GPR137BO60478 399 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 CRYBA1P05813 215 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 ZNF728P0DKX0 622 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 TMEM225BP0DP42 221 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 PMELP40967 661 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 UCP2P55851 309 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 UCP3P55916 312 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 MTCP1P56278 107 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 DSCR4P56555 118 aaPredicted RBP16.24■□□□□ 0.19
DDX39A-206ENST00000587730 RSU1Q15404 277 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 ASCL4Q6XD76 172 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 LHFPL2Q6ZUX7 228 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 RXFP4Q8TDU9 374 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 TECTBQ96PL2 329 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 SF3B5Q9BWJ5 86 aaKnown RBP16.24■□□□□ 0.19
DDX39A-206ENST00000587730 COA4Q9NYJ1 87 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 FBXO9Q9UK97 447 aaPredicted RBP16.24■□□□□ 0.19
DDX39A-206ENST00000587730 AMDHD2Q9Y303 409 aa16.24■□□□□ 0.19
DDX39A-206ENST00000587730 LOC102723996A0A087X1L8 192 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 H7C1Q1 480 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 RAMP1O60894 148 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 OPN1LWP04000 364 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 GABRR1P24046 479 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 CD80P33681 288 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 FOXL2P58012 376 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 SRPXP78539 464 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 OR8B8Q15620 311 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 EXT1Q16394 746 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 ZNF574Q6ZN55 896 aaPredicted RBP16.23■□□□□ 0.19
DDX39A-206ENST00000587730 C6orf201Q7Z4U5 140 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 PPP1R3BQ86XI6 285 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 LFNGQ8NES3 379 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 NPRL2Q8WTW4 380 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 C12orf57Q99622 126 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 SMDT1Q9H4I9 107 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 RGCCQ9H4X1 137 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 IFT22Q9H7X7 185 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 PLEK2Q9NYT0 353 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 KNL1Q8NG31 2342 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 NCOR1O75376 2440 aa16.23■□□□□ 0.19
DDX39A-206ENST00000587730 MEX3AA1L020 520 aaKnown RBP16.22■□□□□ 0.19
DDX39A-206ENST00000587730 FAM157AC9JC47 383 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 SPP1P10451 314 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 RPL35P42766 123 aaKnown RBP16.22■□□□□ 0.19
DDX39A-206ENST00000587730 P2RY1P47900 373 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 PIGPP57054 158 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 FOXRED2Q8IWF2 684 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 LGI3Q8N145 548 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 CCDC71LQ8N9Z2 235 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 MAFIPQ8WZ33 124 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 PIGTQ969N2 578 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 CMSS1Q9BQ75 279 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms