RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 GK3PQ14409 553 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 GINS1Q14691 196 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 LDLRAD2Q5SZI1 272 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 ZBTB37Q5TC79 503 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 MOB3CQ70IA8 216 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 CPOQ8IVL8 374 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 OR4S1Q8NGB4 309 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 OR10G2Q8NGC3 310 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 OR4M1Q8NGD0 313 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 FAM81AQ8TBF8 368 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 MALSU1Q96EH3 234 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 NKX3-1Q99801 234 aaPredicted RBP11.68□□□□□ -0.54
SDF2-202ENST00000585428 AURKAIP1Q9NWT8 199 aaPredicted RBP11.68□□□□□ -0.54
SDF2-202ENST00000585428 TAS2R1Q9NYW7 299 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 USE1Q9NZ43 259 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 TCF19Q9Y242 345 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 ARRDC5A6NEK1 342 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 SLC1A7O00341 560 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 NRASP01111 189 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 TK1P04183 234 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 HMGN1P05114 100 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 PGA5P0DJD9 388 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 SLC2A5P22732 501 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 TRIM25Q14258 630 aaKnown RBP11.67□□□□□ -0.54
SDF2-202ENST00000585428 ZNF273Q14593 569 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 SLC35D3Q5M8T2 416 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 LCN8Q6JVE9 175 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 KRT77Q7Z794 578 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 DHFR2Q86XF0 187 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 OR4F17Q8NGA8 305 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 GIPC3Q8TF64 312 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 SGCDQ92629 289 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 RNF166Q96A37 237 aaPredicted RBP11.67□□□□□ -0.54
SDF2-202ENST00000585428 R3HDM4Q96D70 268 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 ZNF488Q96MN9 340 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 OR4F4Q96R69 305 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 OR8B4Q96RC9 309 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 TEAD3Q99594 435 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 CITED2Q99967 270 aaPredicted RBP11.67□□□□□ -0.54
SDF2-202ENST00000585428 YIPF3Q9GZM5 350 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 PBOV1Q9GZY1 135 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 FAM107BQ9H098 131 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 HES4Q9HCC6 221 aa11.67□□□□□ -0.54
SDF2-202ENST00000585428 GSC2O15499 205 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 SYNGR1O43759 233 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 FAHP16930 419 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 COX7A1P24310 79 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 CEBPDP49716 269 aaPredicted RBP11.66□□□□□ -0.54
SDF2-202ENST00000585428 ROM1Q03395 351 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 CNN3Q15417 329 aaKnown RBP11.66□□□□□ -0.54
SDF2-202ENST00000585428 SMIM21Q3B7S5 101 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 FAM98BQ52LJ0 330 aaKnown RBP11.66□□□□□ -0.54
SDF2-202ENST00000585428 TMEM42Q69YG0 159 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 Q6ZS46 218 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 PIGWQ7Z7B1 504 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 TMEM179BQ7Z7N9 219 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 ZNF573Q86YE8 665 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 BBS1Q8NFJ9 593 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 OR11H6Q8NGC7 330 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 OR51E1Q8TCB6 317 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 PHF21AQ96BD5 680 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 NRIP2Q9BQI9 281 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 PRSS22Q9GZN4 317 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 MUC13Q9H3R2 512 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 GPR84Q9NQS5 396 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 LAMP5Q9UJQ1 280 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 PIGLQ9Y2B2 252 aa11.66□□□□□ -0.54
SDF2-202ENST00000585428 TBL2Q9Y4P3 447 aaKnown RBP11.66□□□□□ -0.54
SDF2-202ENST00000585428 PQLC2LA1A4F0 135 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 ODF3BA8MYP8 253 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 K7N7A8 449 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 ZNF254O75437 659 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 HAAOP46952 286 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 DYNLT3P51808 116 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 ERVK11-1P61568 191 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 BLCAPP62952 87 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 LCN1P1Q5VSP4 162 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 FOXB2Q5VYV0 432 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 PLCXD3Q63HM9 321 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 KCTD18Q6PI47 426 aaPredicted RBP11.65□□□□□ -0.54
SDF2-202ENST00000585428 ARHGAP24Q8N264 748 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 RPS4Y2Q8TD47 263 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 CHID1Q9BWS9 393 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 MROQ9BYG7 248 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 C1orf21Q9H246 121 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 ENPP5Q9UJA9 477 aa11.65□□□□□ -0.54
SDF2-202ENST00000585428 PRR32B1ATL7 298 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 B2RBV5 119 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 J3QT63 122 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 PSMD9O00233 223 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 DLGAP1O14490 977 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 SRSF10O75494 262 aaKnown RBP11.64□□□□□ -0.55
SDF2-202ENST00000585428 DHRS3O75911 302 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 CST1P01037 141 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 RBP4P02753 201 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 ARG1P05089 322 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 RAP2AP10114 183 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 OSMP13725 252 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 MPZP25189 248 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 MNAT1P51948 309 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms