RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 SIRPDQ9H106 197 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 DUX4Q9UBX2 424 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 GNG8Q9UK08 70 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 SLC22A13Q9Y226 551 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 IGHV1-69DA0A0B4J2H0 117 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 A0A1B0GTI1 187 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 A0A1W2PQ09 198 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 J3QT63 122 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 HOXA3O43365 443 aaPredicted RBP10.22□□□□□ -0.77
SS18-225ENST00000585121 IGHV1-69P01742 117 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 CRYBA1P05813 215 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 CAV3P56539 151 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 SNRPGP62308 76 aaKnown RBP10.22□□□□□ -0.77
SS18-225ENST00000585121 ACTC1P68032 377 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 ACTA1P68133 377 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 BLMHQ13867 455 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 ZIK1Q3SY52 487 aaPredicted RBP10.22□□□□□ -0.77
SS18-225ENST00000585121 RUSC1-AS1Q66K80 236 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 TMEM42Q69YG0 159 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 C16orf87Q6PH81 154 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 VMO1Q7Z5L0 202 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 KCTD20Q7Z5Y7 419 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 CBR4Q8N4T8 237 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 TMEM185AQ8NFB2 350 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 RNFT2Q96EX2 444 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 PRDM13Q9H4Q3 707 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 ACOXLQ9NUZ1 547 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 CAB39Q9Y376 341 aaPredicted RBP10.22□□□□□ -0.77
SS18-225ENST00000585121 PCDHGB1Q9Y5G3 927 aa10.22□□□□□ -0.77
SS18-225ENST00000585121 SOX21Q9Y651 276 aaPredicted RBP10.22□□□□□ -0.77
SS18-225ENST00000585121 MDFIC2A0A1B0GVS7 189 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 DAPL1A0PJW8 107 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 ENTPD6O75354 484 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 FCN3O75636 299 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 GATBO75879 557 aaKnown RBP10.21□□□□□ -0.78
SS18-225ENST00000585121 NXPH2O95156 264 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 UBCP0CG48 685 aaKnown RBP10.21□□□□□ -0.78
SS18-225ENST00000585121 PSG2P11465 335 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 AMY2BP19961 511 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 CCL1P22362 96 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 EEF1B2P24534 225 aaKnown RBP10.21□□□□□ -0.78
SS18-225ENST00000585121 GUCA2AQ02747 115 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 SLC25A30Q5SVS4 291 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 ACP7Q6ZNF0 438 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 Q6ZSR3 168 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 FGFRL1Q8N441 504 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 TMEM86BQ8N661 226 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 POC1AQ8NBT0 407 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 C8orf46Q8TAG6 207 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 TBC1D15Q8TC07 691 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 RORBQ92753 470 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 C1orf147Q96MC9 270 aaPredicted RBP10.21□□□□□ -0.78
SS18-225ENST00000585121 SLC29A1Q99808 456 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 RAB26Q9ULW5 256 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 FAM96BQ9Y3D0 163 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 GMPPBQ9Y5P6 360 aa10.21□□□□□ -0.78
SS18-225ENST00000585121 TENM1Q9UKZ4 2725 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 NBEAL1Q6ZS30 2694 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 IGKV1D-17A0A075B6S4 117 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 TRBV23-1A0A0A0MS06 115 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 PQLC2LA1A4F0 135 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 ANKRD61A6NGH8 418 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 A6NIN4 97 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 SLC1A7O00341 560 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 MPZL2O60487 215 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 PGA5P0DJD9 388 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 SELLP14151 372 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 OCLNQ16625 522 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 DGUOKQ16854 277 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 TP53I3Q53FA7 332 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 TMEM244Q5VVB8 128 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 Q6YL49 198 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 C1orf122Q6ZSJ8 110 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 PDZD9Q8IXQ8 264 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 NPRL2Q8WTW4 380 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 SSMEM1Q8WWF3 244 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 UBE2FQ969M7 185 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 C10orf35Q96D05 121 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 SDSLQ96GA7 329 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 Q96MT0 163 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 TNFRSF19Q9NS68 423 aa10.2□□□□□ -0.78
SS18-225ENST00000585121 A0A1W2PPH5 198 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 FAM230AA0A1W2PPH8 454 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 RFPL4AA6NLU0 287 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 RFPL4AL1F8VTS6 287 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 H3BSH0 61 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 M0R1W7 72 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 SYNGR1O43759 233 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 NOS1APO75052 506 aaPredicted RBP10.19□□□□□ -0.78
SS18-225ENST00000585121 PRDX2P32119 198 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 FUT6P51993 359 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 AQP4P55087 323 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 ZNF85Q03923 595 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 CNN3Q15417 329 aaKnown RBP10.19□□□□□ -0.78
SS18-225ENST00000585121 ZNF561Q8N587 486 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 ACBD7Q8N6N7 88 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 ZNRF1Q8ND25 227 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 SGMS2Q8NHU3 365 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 TRMT10AQ8TBZ6 339 aaKnown RBP10.19□□□□□ -0.78
SS18-225ENST00000585121 RDH12Q96NR8 316 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms