RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 OPRL1P41146 370 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 MAP3K8P41279 467 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 CRYBA2P53672 197 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 SELENOTP62341 195 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 EBPQ15125 230 aaKnown RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 TRMT5Q32P41 509 aaKnown RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 REEP3Q6NUK4 255 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 DNM1P46Q6ZS02 220 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 H2BFWTQ7Z2G1 175 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 OAFQ86UD1 273 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF329Q86UD4 541 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 SPATA24Q86W54 205 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 CATSPERDQ86XM0 798 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 SPAG16Q8N0X2 631 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 KRT222Q8N1A0 295 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 PACRGLQ8N7B6 248 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 OR4C5Q8NGB2 326 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 NEIL3Q8TAT5 605 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 GPR151Q8TDV0 419 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 OSTF1Q92882 214 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 DLX4Q92988 240 aaPredicted RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 HGDQ93099 445 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 CHMP6Q96FZ7 201 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 DUS3LQ96G46 650 aaKnown RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 PRAP1Q96NZ9 151 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 PANX1Q96RD7 426 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 AUNIPQ9H7T9 357 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 FOLH1BQ9HBA9 442 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 BEX1Q9HBH7 125 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 DHCR7Q9UBM7 475 aaKnown RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF229Q9UJW7 825 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 KCNIP3Q9Y2W7 256 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 GOLT1BQ9Y3E0 138 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 L3MBTL1Q9Y468 752 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 HSPE1-MOB4S4R3N1 261 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 WDFY3Q8IZQ1 3526 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 DYNC2H1Q8NCM8 4307 aaKnown RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 IGLV7-46A0A075B6I9 117 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 UQCRHLA0A096LP55 91 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 TRBV11-1A0A0K0K1C0 115 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 CCT8L1PA6NM43 557 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 PMS2P5A8MQ11 134 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 A8MXK9 166 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 BMPR1BO00238 502 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 OR7A17O14581 309 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF264O43296 627 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 EDF1O60869 148 aaKnown RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 UGT2B11O75310 529 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 FARS2O95363 451 aaKnown RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 AHSA1O95433 338 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 F10P00742 488 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 IFNGP01579 166 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 GIPP09681 153 aaPredicted RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF133P52736 654 aaPredicted RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM50BP56557 158 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 ST3GAL3Q11203 375 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 IL18R1Q13478 541 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 PTGES3Q15185 160 aaKnown RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 MICBQ29980 383 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 ZFP69Q49AA0 526 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 BEX5Q5H9J7 111 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 ULK3Q6PHR2 472 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 FOXL2NBQ6ZUU3 175 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 PGAP1Q75T13 922 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 RIMKLAQ8IXN7 391 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 SVOPLQ8N434 492 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 FTMTQ8N4E7 242 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 JAGN1Q8N5M9 183 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF615Q8N8J6 731 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 ASCC1Q8N9N2 400 aaKnown RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF740Q8NDX6 193 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 OR2T11Q8NH01 316 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 FANK1Q8TC84 345 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC7A13Q8TCU3 470 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 TCP10LQ8TDR4 215 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF721Q8TF20 911 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 MITD1Q8WV92 249 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 GEMIN6Q8WXD5 167 aaKnown RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 PPWD1Q96BP3 646 aaKnown RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF681Q96N22 645 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 F2RL3Q96RI0 385 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 RNF2Q99496 336 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 BCL7BQ9BQE9 202 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 MMP28Q9H239 520 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 TPK1Q9H3S4 243 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 KCNJ16Q9NPI9 418 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 INPP5EQ9NRR6 644 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 PLCXD1Q9NUJ7 323 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 UBAP1Q9NZ09 502 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 MAT2BQ9NZL9 334 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 THYN1Q9P016 225 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 MOKQ9UQ07 419 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 FAM32AQ9Y421 112 aaKnown RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 CPAMD8Q8IZJ3 1885 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 CEP295Q9C0D2 2601 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PIEZO2Q9H5I5 2752 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 DHRS7CA6NNS2 312 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PLPP1O14494 284 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 RFXANKO14593 260 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 OR10H3O60404 316 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms