RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 LYNP07948 512 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 CLUP10909 449 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 ATP6V1B1P15313 513 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 HOXD3P31249 432 aaPredicted RBP10.72□□□□□ -0.69
COPS3-218ENST00000584216 PSME3P61289 254 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 SLC34A1Q06495 639 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 SF3A3Q12874 501 aaKnown RBP eCLIP10.72□□□□□ -0.69
COPS3-218ENST00000584216 IL18R1Q13478 541 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 ZNF273Q14593 569 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 TMEM95Q3KNT9 176 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 CEP78Q5JTW2 689 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 LCN1P1Q5VSP4 162 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 ZNF770Q6IQ21 691 aaPredicted RBP10.72□□□□□ -0.69
COPS3-218ENST00000584216 UNQ9370/PRO34162Q6UXP9 181 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 KRT74Q7RTS7 529 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 CD177Q8N6Q3 437 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 ZNF454Q8N9F8 522 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 MYDGFQ969H8 173 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 CHID1Q9BWS9 393 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 INPP5EQ9NRR6 644 aa10.72□□□□□ -0.69
COPS3-218ENST00000584216 C3orf84H3BNL1 204 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 DNAJC8O75937 253 aaPredicted RBP10.71□□□□□ -0.69
COPS3-218ENST00000584216 NXPH2O95156 264 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 ZNF728P0DKX0 622 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 ARHGDIBP52566 201 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 PSMA6P60900 246 aaKnown RBP10.71□□□□□ -0.69
COPS3-218ENST00000584216 COL7A1Q02388 2944 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 COL10A1Q03692 680 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 LINC01590Q5TEZ4 76 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 Q6ZS46 218 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 ZBTB49Q6ZSB9 765 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 RNF144BQ7Z419 303 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 ZNF573Q86YE8 665 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 OR8D4Q8NGM9 314 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 NDNFQ8TB73 568 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 CMTM5Q96DZ9 223 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 LYZL4Q96KX0 146 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 LIN7BQ9HAP6 207 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 U3KQK5 164 aa10.71□□□□□ -0.69
COPS3-218ENST00000584216 A0A0U1RQV5 110 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 ACOD1A6NK06 481 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 FAM90A22PA8MWA6 464 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 TNFRSF11BO00300 401 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 GSC2O15499 205 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 IGHV1-8P0DP01 117 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 PIPP12273 146 aaPredicted RBP10.7□□□□□ -0.7
COPS3-218ENST00000584216 H2AFXP16104 143 aaPredicted RBP10.7□□□□□ -0.7
COPS3-218ENST00000584216 LMO1P25800 156 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 RIPPLY1Q0D2K3 151 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 TCTEX1D4Q5JR98 221 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 PLCXD3Q63HM9 321 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 CGB2Q6NT52 195 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 HDXQ7Z353 690 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 COMMD2Q86X83 199 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 LINC00482Q8N8I6 264 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 OR9Q2Q8NGE9 314 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 OR8B12Q8NGG6 310 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 OTOSQ8NHW6 89 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 THEM6Q8WUY1 208 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 OTULINQ96BN8 352 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 NSMCE2Q96MF7 247 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 AMELYQ99218 206 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 BTBD10Q9BSF8 475 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 CMC2Q9NRP2 79 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.7□□□□□ -0.7
COPS3-218ENST00000584216 HILPDAQ9Y5L2 63 aa10.7□□□□□ -0.7
COPS3-218ENST00000584216 J3QT63 122 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 NOS1APO75052 506 aaPredicted RBP10.69□□□□□ -0.7
COPS3-218ENST00000584216 CCNB2O95067 398 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 PGA5P0DJD9 388 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 BRS3P32247 399 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 HAAOP46952 286 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 HMGA2P52926 109 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 DLX6P56179 175 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 ZNF684Q5T5D7 378 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 MOB3CQ70IA8 216 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 GDPD3Q7L5L3 318 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 OR4Q3Q8NH05 313 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 ZNF714Q96N38 554 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 OR8B4Q96RC9 309 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 OR14J1Q9UGF5 321 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 ENPP5Q9UJA9 477 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 LYVE1Q9Y5Y7 322 aa10.69□□□□□ -0.7
COPS3-218ENST00000584216 K7N7A8 449 aa10.68□□□□□ -0.7
COPS3-218ENST00000584216 RAMP3O60896 148 aa10.68□□□□□ -0.7
COPS3-218ENST00000584216 ZFPL1O95159 310 aa10.68□□□□□ -0.7
COPS3-218ENST00000584216 GASTP01350 101 aa10.68□□□□□ -0.7
COPS3-218ENST00000584216 LPLP06858 475 aa10.68□□□□□ -0.7
COPS3-218ENST00000584216 SLC6A1P30531 599 aa10.68□□□□□ -0.7
COPS3-218ENST00000584216 CEBPDP49716 269 aaPredicted RBP10.68□□□□□ -0.7
COPS3-218ENST00000584216 EDDM3BP56851 147 aa10.68□□□□□ -0.7
COPS3-218ENST00000584216 ACTA2P62736 377 aa10.68□□□□□ -0.7
COPS3-218ENST00000584216 ACTG2P63267 376 aa10.68□□□□□ -0.7
COPS3-218ENST00000584216 ACTC1P68032 377 aa10.68□□□□□ -0.7
COPS3-218ENST00000584216 ACTA1P68133 377 aa10.68□□□□□ -0.7
COPS3-218ENST00000584216 DGCR2P98153 550 aa10.68□□□□□ -0.7
COPS3-218ENST00000584216 MEF2CQ06413 473 aaPredicted RBP10.68□□□□□ -0.7
COPS3-218ENST00000584216 KRT77Q7Z794 578 aa10.68□□□□□ -0.7
COPS3-218ENST00000584216 RNF148Q8N7C7 305 aa10.68□□□□□ -0.7
COPS3-218ENST00000584216 ASCC1Q8N9N2 400 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms