RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	MAB21L2	Q9Y586	359 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ORC6	Q9Y5N6	252 aa		11.2	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	FAM230A	A0A1W2PPH8	454 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	PQLC2L	A1A4F0	135 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	RFPL4A	A6NLU0	287 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	RFPL4AL1	F8VTS6	287 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	RNASEK-C17orf49	H0YIS7	233 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186		J3QT63	122 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	DLGAP1	O14490	977 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	SYT7	O43581	403 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	NXPH2	O95156	264 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	CAV3	P56539	151 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	GUCA2A	Q02747	115 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	BLMH	Q13867	455 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	SMIM21	Q3B7S5	101 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ZIK1	Q3SY52	487 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	TMEM42	Q69YG0	159 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ACP7	Q6ZNF0	438 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	CCDC121	Q6ZUS5	278 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	CATSPERD	Q86XM0	798 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	FAM185A	Q8N0U4	392 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	PNKD	Q8N490	385 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	TMEM86B	Q8N661	226 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	POC1A	Q8NBT0	407 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	C8orf46	Q8TAG6	207 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	TRMT10A	Q8TBZ6	339 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	NPRL2	Q8WTW4	380 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	RASL12	Q9NYN1	266 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	OR14J1	Q9UGF5	321 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	GNG8	Q9UK08	70 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ZNF222	Q9UK12	451 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	POLDIP2	Q9Y2S7	368 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	POMT1	Q9Y6A1	747 aa		11.19	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ANKRD61	A6NGH8	418 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	POM121C	A8CG34	1229 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	SLC1A7	O00341	560 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	EI24	O14681	340 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	NPFF	O15130	113 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	SULT1C4	O75897	302 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	INMT	O95050	263 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	PGA5	P0DJD9	388 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	PRDX2	P32119	198 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	IER3	P46695	156 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	CEBPD	P49716	269 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	RAG2	P55895	527 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	TP53I3	Q53FA7	332 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	FAM220A	Q7Z4H9	259 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ANGPTL5	Q86XS5	388 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	CD177	Q8N6Q3	437 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	OR4F5	Q8NH21	305 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	RORB	Q92753	470 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	SDSL	Q96GA7	329 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	DMRTB1	Q96MA1	342 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	METTL8	Q9H825	291 aa	Known RBP	11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	C1RL	Q9NZP8	487 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	SLC7A11	Q9UPY5	501 aa		11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	CAB39	Q9Y376	341 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	PKD1L1	Q8TDX9	2849 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	MEIOC	A2RUB1	952 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	DHRS7C	A6NNS2	312 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186		H0YAE9	185 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186		H3BNX3	289 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186		M0R1W7	72 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ENTPD6	O75354	484 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	PAH	P00439	452 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	KNG1	P01042	644 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ALPL	P05186	524 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	FBP1	P09467	338 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	CCL1	P22362	96 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	RELB	Q01201	579 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	TMED1	Q13445	227 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	NCR3LG1	Q68D85	454 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	METAP1D	Q6UB28	335 aa	Predicted RBP	11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	CALHM1	Q8IU99	346 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	RDH10	Q8IZV5	341 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	OR4M1	Q8NGD0	313 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	RNFT2	Q96EX2	444 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	NRIP2	Q9BQI9	281 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	DPAGT1	Q9H3H5	408 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	BEX1	Q9HBH7	125 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	C19orf12	Q9NSK7	152 aa		11.17	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	TRBV23-1	A0A0A0MS06	115 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	BTBD17	A6NE02	478 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	GPR137B	O60478	399 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	SAA4	P35542	130 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ALDH3A2	P51648	485 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	RPL31	P62899	125 aa	Known RBP	11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ZNF85	Q03923	595 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	UBE2V2	Q15819	145 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ZFP1	Q6P2D0	407 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	C17orf107	Q6ZR85	190 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	C1orf122	Q6ZSJ8	110 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	LDLRAD3	Q86YD5	345 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	PRSS35	Q8N3Z0	413 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	CBR4	Q8N4T8	237 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ZNF561	Q8N587	486 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	TRUB1	Q8WWH5	349 aa	Known RBP	11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	DYRK2	Q92630	601 aa		11.16	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	TNFRSF14	Q92956	283 aa		11.16	□□□□□ -0.62

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