RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 NUDT21O43809 227 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 CREBL2O60519 120 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 EIF4E2O60573 245 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 CTNSO60931 367 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 RBBP9O75884 186 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 AIFM1O95831 613 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 IFNGP01579 166 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 MT-ND4P03905 459 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 ALDOBP05062 364 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 PROS1P07225 676 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 SFTPBP07988 381 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 TACSTD2P09758 323 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 DUX4L4P0CJ87 422 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 RPA2P15927 270 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 PYCR1P32322 319 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 ACVR1BP36896 505 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 PRRC2AP48634 2157 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 GDI2P50395 445 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 TPMTP51580 245 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 VSX2P58304 361 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 HERV-K104P61576 105 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 TSPAN5P62079 268 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 RASGEF1BQ0VAM2 473 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 BTN1A1Q13410 526 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 MADCAM1Q13477 382 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 HTR4Q13639 388 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 GK2Q14410 553 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 IRF4Q15306 451 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 MLF2Q15773 248 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 HNRNPA1L2Q32P51 320 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 PABPC1L2AQ5JQF8 200 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 TMEM255AQ5JRV8 349 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 FAM27D1Q5T7N8 215 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 FHL5Q5TD97 284 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 PLPP4Q5VZY2 271 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 LYSMD4Q5XG99 296 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 ARL9Q6T311 187 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 CD164L2Q6UWJ8 174 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 APOOLQ6UXV4 268 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF836Q6ZNA1 936 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 OLIG3Q7RTU3 272 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 ANKRD33Q7Z3H0 272 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 RANBP3LQ86VV4 465 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 PDZD9Q8IXQ8 264 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 MMD2Q8IY49 270 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 DND1Q8IYX4 353 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 LINC00518Q8N0U6 118 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 C2orf73Q8N5S3 287 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 BEST4Q8NFU0 473 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 OR10H4Q8NGA5 316 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 OR4D9Q8NGE8 314 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 OR56B2PQ8NGI1 322 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 OR52B4Q8NGK2 314 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 OR5J2Q8NH18 312 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 NT5CQ8TCD5 201 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 LIPHQ8WWY8 451 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 OR8D1Q8WZ84 308 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 TSACCQ96A04 125 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 HAVCR1Q96D42 359 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC25A38Q96DW6 304 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 PELI1Q96FA3 418 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 LINC00052Q96N35 136 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 TSSK2Q96PF2 358 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 TAAR6Q96RI8 345 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 TNFRSF13CQ96RJ3 184 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 CCNL2Q96S94 520 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 TIMM29Q9BSF4 260 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 RPP25Q9BUL9 199 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 NMNAT2Q9BZQ4 307 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 ZBP1Q9H171 429 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 C1orf198Q9H425 327 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 MED20Q9H944 212 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 CACYBPQ9HB71 228 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 TMEM27Q9HBJ8 222 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 MRPS30Q9NP92 439 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 MEPEQ9NQ76 525 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 PRSS16Q9NQE7 514 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 YAE1D1Q9NRH1 226 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 MED11Q9P086 117 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 MTFP1Q9UDX5 166 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 OR5V1Q9UGF6 321 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 CHRNA9Q9UGM1 479 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 APOBEC3BQ9UH17 382 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 FLVCR2Q9UPI3 526 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 MOKQ9UQ07 419 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 CCL26Q9Y258 94 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 NTNG1Q9Y2I2 539 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 MED31Q9Y3C7 131 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 AK6Q9Y3D8 172 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 WDR45Q9Y484 360 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 PCYT1BQ9Y5K3 369 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 CCDC88CQ9P219 2028 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 DENND4AQ7Z401 1863 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 A0A0B4J2E0 115 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 A0A0D9SG52 128 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 A0A0U1RRA0 63 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 A0A1B0GW55 424 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 A0A1B0GX12 115 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 A0A1W2PR80 420 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 RAB19A4D1S5 217 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms