RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 PSMC5P62195 406 aa2.77□□□□□ -1.97
SMARCE1-219ENST00000583294 RPL31P62899 125 aaKnown RBP2.77□□□□□ -1.97
SMARCE1-219ENST00000583294 LAMTOR4Q0VGL1 99 aa2.77□□□□□ -1.97
SMARCE1-219ENST00000583294 DUPD1Q68J44 220 aa2.77□□□□□ -1.97
SMARCE1-219ENST00000583294 ASCL4Q6XD76 172 aa2.77□□□□□ -1.97
SMARCE1-219ENST00000583294 ITPRIPQ8IWB1 547 aa2.77□□□□□ -1.97
SMARCE1-219ENST00000583294 TSNAXQ99598 290 aaKnown RBP2.77□□□□□ -1.97
SMARCE1-219ENST00000583294 C20orf144Q9BQM9 153 aa2.77□□□□□ -1.97
SMARCE1-219ENST00000583294 STX18Q9P2W9 335 aaKnown RBP2.77□□□□□ -1.97
SMARCE1-219ENST00000583294 ORC6Q9Y5N6 252 aa2.77□□□□□ -1.97
SMARCE1-219ENST00000583294 TMEM131Q92545 1883 aa2.77□□□□□ -1.97
SMARCE1-219ENST00000583294 NPHP4O75161 1426 aaPredicted RBP2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 KIF27Q86VH2 1401 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 IGKV3D-11A0A0A0MRZ8 115 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 H7C2Y5 167 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 DHRS3O75911 302 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 GZMAP12544 262 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 HOXB8P17481 243 aaPredicted RBP2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 HLA-GP17693 338 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 ATP5G2Q06055 141 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 NDUFAF6Q330K2 333 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 HSP90AA4PQ58FG1 418 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 TTC32Q5I0X7 151 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 TMEM69Q5SWH9 247 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 FAM27D1Q5T7N8 215 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 LRRC8AQ8IWT6 810 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 RNF10Q8N5U6 811 aaKnown RBP2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 CENPNQ96H22 339 aaPredicted RBP2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 RNF170Q96K19 258 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 PORCNQ9H237 461 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 CFL2Q9Y281 166 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 SETD1AO15047 1707 aaKnown RBP2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 CACNA1DQ01668 2161 aa2.76□□□□□ -1.97
SMARCE1-219ENST00000583294 FAM240AA0A1B0GVK7 77 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 IGHV1-46P01743 117 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 STAG3L2P0CL84 134 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 HLA-DMAP28067 261 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 PMVKQ15126 192 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 FBXL19-AS1Q494R0 122 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 SPIN3Q5JUX0 258 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 FAM57AQ8TBR7 257 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 ORAOV1Q8WV07 137 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 RBPMSQ93062 196 aaKnown RBP2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 FAM131CQ96AQ9 280 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 HMGXB4Q9UGU5 601 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 ZNF391Q9UJN7 358 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 RAB23Q9ULC3 237 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 SLC22A7Q9Y694 548 aa2.75□□□□□ -1.97
SMARCE1-219ENST00000583294 A0A1W2PNN7 141 aa2.74□□□□□ -1.97
SMARCE1-219ENST00000583294 GMDSO60547 372 aa2.74□□□□□ -1.97
SMARCE1-219ENST00000583294 TAS2R60P59551 318 aa2.74□□□□□ -1.97
SMARCE1-219ENST00000583294 RPL10AP62906 217 aaKnown RBP2.74□□□□□ -1.97
SMARCE1-219ENST00000583294 IL5RAQ01344 420 aa2.74□□□□□ -1.97
SMARCE1-219ENST00000583294 OR4D6Q8NGJ1 314 aa2.74□□□□□ -1.97
SMARCE1-219ENST00000583294 ZFAND1Q8TCF1 268 aa2.74□□□□□ -1.97
SMARCE1-219ENST00000583294 TMED9Q9BVK6 235 aa2.74□□□□□ -1.97
SMARCE1-219ENST00000583294 MRPL20Q9BYC9 149 aaKnown RBP2.74□□□□□ -1.97
SMARCE1-219ENST00000583294 GAL3ST2Q9H3Q3 398 aa2.74□□□□□ -1.97
SMARCE1-219ENST00000583294 TDRD3Q9H7E2 651 aaKnown RBP2.74□□□□□ -1.97
SMARCE1-219ENST00000583294 OR2S2Q9NQN1 319 aa2.74□□□□□ -1.97
SMARCE1-219ENST00000583294 TRAV8-7A0A075B6U6 113 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 IZUMO1RA6ND01 250 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 SEC14L6B5MCN3 397 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 KLHL2O95198 593 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 IGKV1D-16P01601 117 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 CRYGCP07315 174 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 OR5AL1P0C617 328 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 OR4Q2P0C623 313 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 OR5AC1P0C628 307 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 CD34P28906 385 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 ZNF235Q14590 738 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 CDNFQ49AH0 187 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 C6orf183Q5T699 404 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 FAM104BQ5XKR9 115 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 ADM2Q7Z4H4 148 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 PRNTQ86SH4 94 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 ITLN2Q8WWU7 325 aaPredicted RBP2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 TVP23CQ96ET8 276 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 SMIM8Q96KF7 97 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 ZNF649Q9BS31 505 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 BEX2Q9BXY8 128 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 API5Q9BZZ5 524 aaKnown RBP2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 COA1Q9GZY4 146 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 PRO0628Q9UI54 55 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 DYSFO75923 2080 aa2.73□□□□□ -1.97
SMARCE1-219ENST00000583294 TVP23AA6NH52 213 aa2.72□□□□□ -1.97
SMARCE1-219ENST00000583294 RNF113AO15541 343 aaKnown RBP2.72□□□□□ -1.97
SMARCE1-219ENST00000583294 KDELR3O43731 214 aa2.72□□□□□ -1.97
SMARCE1-219ENST00000583294 SNAI1O95863 264 aaPredicted RBP2.72□□□□□ -1.97
SMARCE1-219ENST00000583294 CXorf1O96002 111 aa2.72□□□□□ -1.97
SMARCE1-219ENST00000583294 CDK1P06493 297 aa2.72□□□□□ -1.97
SMARCE1-219ENST00000583294 RHOCP08134 193 aa2.72□□□□□ -1.97
SMARCE1-219ENST00000583294 LIPCP11150 499 aa2.72□□□□□ -1.97
SMARCE1-219ENST00000583294 ZNF35P13682 527 aa2.72□□□□□ -1.97
SMARCE1-219ENST00000583294 COL8A2P25067 703 aa2.72□□□□□ -1.97
SMARCE1-219ENST00000583294 TUFMP49411 452 aaKnown RBP2.72□□□□□ -1.97
SMARCE1-219ENST00000583294 OR12D2P58182 307 aa2.72□□□□□ -1.97
SMARCE1-219ENST00000583294 TAL2Q16559 108 aa2.72□□□□□ -1.97
SMARCE1-219ENST00000583294 NKAIN1Q4KMZ8 207 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms