RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SIGLEC9Q9Y336 463 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 RPL36Q9Y3U8 105 aaKnown RBP11.09□□□□□ -0.63
SS18-222ENST00000582792 COL7A1Q02388 2944 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 ZNF670-ZNF695F2Z2N8 137 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 ZNF254O75437 659 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 SLC2A1P11166 492 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 AMY2BP19961 511 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 KIR2DS4P43632 304 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 PRKXP51817 358 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 UBE2E1P51965 193 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 AQP4P55087 323 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 CSNK2BP67870 215 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 IL5RAQ01344 420 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 ROM1Q03395 351 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 IKZF1Q13422 519 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 LRRC10Q5BKY1 277 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 STUMQ69YW2 141 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 C1orf122Q6ZSJ8 110 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 THAP5Q7Z6K1 395 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 PNKDQ8N490 385 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 BEND2Q8NDZ0 799 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 PPP1R35Q8TAP8 253 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 APH1BQ8WW43 257 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 PPP1R14AQ96A00 147 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 SEH1LQ96EE3 360 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 MYCBPQ99417 103 aaPredicted RBP11.08□□□□□ -0.64
SS18-222ENST00000582792 COPS4Q9BT78 406 aa11.08□□□□□ -0.64
SS18-222ENST00000582792 IRGMA1A4Y4 181 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 ACOD1A6NK06 481 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 H3BUX3 64 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 J3QRE1 110 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 WBP4O75554 376 aaKnown RBP11.07□□□□□ -0.64
SS18-222ENST00000582792 DBTP11182 482 aaKnown RBP11.07□□□□□ -0.64
SS18-222ENST00000582792 SELLP14151 372 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 ACTC1P68032 377 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 ACTA1P68133 377 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 RAB40BQ12829 278 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 TAF13Q15543 124 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 ATPAF1Q5TC12 328 aaPredicted RBP11.07□□□□□ -0.64
SS18-222ENST00000582792 NCR3LG1Q68D85 454 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 ZNF679Q8IYX0 411 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 C11orf44Q8N8P7 122 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 OR51G2Q8NGK0 314 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 THEM6Q8WUY1 208 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 H1FXQ92522 213 aaKnown RBP11.07□□□□□ -0.64
SS18-222ENST00000582792 ITFG2Q969R8 447 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 RNFT2Q96EX2 444 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 DNTTIP1Q9H147 329 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 TLNRD1Q9H1K6 362 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 METTL8Q9H825 291 aaKnown RBP11.07□□□□□ -0.64
SS18-222ENST00000582792 INPP5EQ9NRR6 644 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 CENPMQ9NSP4 180 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 FOXJ3Q9UPW0 622 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 N6AMT1Q9Y5N5 214 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 DNAH3Q8TD57 4116 aa11.07□□□□□ -0.64
SS18-222ENST00000582792 M0R1W7 72 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 CDIPTO14735 213 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 CLIC3O95833 236 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 MRPL3P09001 348 aaKnown RBP11.06□□□□□ -0.64
SS18-222ENST00000582792 H2BFMP0C1H6 154 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 HSD11B1P28845 292 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 ATP6V1E1P36543 226 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 FAM3AP98173 230 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 ZNF91Q05481 1191 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 KLHL22Q53GT1 634 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 IZUMO2Q6UXV1 221 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.06□□□□□ -0.64
SS18-222ENST00000582792 KLHDC1Q8N7A1 406 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 OR5T2Q8NGG2 359 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 OR4C13Q8NGP0 309 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 MRAPQ8TCY5 172 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 OR8B4Q96RC9 309 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 AMELYQ99218 206 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 SSX3Q99909 188 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 JAM3Q9BX67 310 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 MROQ9BYG7 248 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 RANBP3Q9H6Z4 567 aaPredicted RBP11.06□□□□□ -0.64
SS18-222ENST00000582792 PLCXD1Q9NUJ7 323 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 RAB26Q9ULW5 256 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 COPS3Q9UNS2 423 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 KLHDC2Q9Y2U9 406 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 MAB21L2Q9Y586 359 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 NOTCH3Q9UM47 2321 aa11.06□□□□□ -0.64
SS18-222ENST00000582792 hCG_38984A0A1B0GV85 526 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 TBX1O43435 398 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 SULT1C4O75897 302 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 FADS2O95864 444 aaKnown RBP11.05□□□□□ -0.64
SS18-222ENST00000582792 MYF6P23409 242 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 HCCSP53701 268 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 LOXL3P58215 753 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 CXCR4P61073 352 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 ZNF322Q6U7Q0 402 aaPredicted RBP11.05□□□□□ -0.64
SS18-222ENST00000582792 ZNF788Q6ZQV5 615 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 KCTD20Q7Z5Y7 419 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 KRT77Q7Z794 578 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 OR2T6Q8NHC8 308 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 LGALS12Q96DT0 336 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 MRPL48Q96GC5 212 aaKnown RBP11.05□□□□□ -0.64
SS18-222ENST00000582792 REEP6Q96HR9 211 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 ANKRD60Q9BZ19 345 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms