RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 FAM3AP98173 230 aa11.95□□□□□ -0.5
GGA3-214ENST00000582717 DCAF12Q5T6F0 453 aa11.95□□□□□ -0.5
GGA3-214ENST00000582717 ZNF468Q5VIY5 522 aaPredicted RBP11.95□□□□□ -0.5
GGA3-214ENST00000582717 Q6ZRG5 221 aa11.95□□□□□ -0.5
GGA3-214ENST00000582717 RPS19BP1Q86WX3 136 aaKnown RBP11.95□□□□□ -0.5
GGA3-214ENST00000582717 LINC00469Q8N7U9 141 aa11.95□□□□□ -0.5
GGA3-214ENST00000582717 TMEM104Q8NE00 496 aa11.95□□□□□ -0.5
GGA3-214ENST00000582717 C11orf40Q8WZ69 217 aa11.95□□□□□ -0.5
GGA3-214ENST00000582717 ANGPTL4Q9BY76 406 aa11.95□□□□□ -0.5
GGA3-214ENST00000582717 MRPL13Q9BYD1 178 aaKnown RBP11.95□□□□□ -0.5
GGA3-214ENST00000582717 SH2D2AQ9NP31 389 aa11.95□□□□□ -0.5
GGA3-214ENST00000582717 GSN-AS1Q9NRJ2 163 aa11.95□□□□□ -0.5
GGA3-214ENST00000582717 C1orf123Q9NWV4 160 aa11.95□□□□□ -0.5
GGA3-214ENST00000582717 PCSK5Q92824 1860 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 K7EPK0 472 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 ZNF44P15621 663 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 RPL12P30050 165 aaKnown RBP11.94□□□□□ -0.5
GGA3-214ENST00000582717 EIF1P41567 113 aaKnown RBP11.94□□□□□ -0.5
GGA3-214ENST00000582717 ECI1P42126 302 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 MLF1P58340 268 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 POLR2GP62487 172 aaKnown RBP eCLIP11.94□□□□□ -0.5
GGA3-214ENST00000582717 EIF3IQ13347 325 aaKnown RBP11.94□□□□□ -0.5
GGA3-214ENST00000582717 ARFRP1Q13795 201 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 AADACL3Q5VUY0 350 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 PPP1R32Q7Z5V6 425 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 RTN4RL2Q86UN3 420 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 OR5AS1Q8N127 324 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 FAM71E2Q8N5Q1 922 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 SLC25A43Q8WUT9 341 aaPredicted RBP11.94□□□□□ -0.5
GGA3-214ENST00000582717 NTNG2Q96CW9 530 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 AKR1E2Q96JD6 320 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 GNRHR2Q96P88 292 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 RPS10P5Q9NQ39 176 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 GSKIPQ9P0R6 139 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 STARD10Q9Y365 291 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 PHF3Q92576 2039 aaKnown RBP11.94□□□□□ -0.5
GGA3-214ENST00000582717 C9JQL5 133 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 AGPAT2O15120 278 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 RAD51DO75771 328 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 PGA4P0DJD7 388 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 PGA3P0DJD8 388 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 ZNF708P17019 499 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 PI3P19957 117 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 S100PP25815 95 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 GLP1RP43220 463 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 PPT1P50897 306 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 HGFACQ04756 655 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 SLC16A13Q7RTY0 426 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 TIPARPQ7Z3E1 657 aaKnown RBP11.94□□□□□ -0.5
GGA3-214ENST00000582717 NOXO1Q8NFA2 376 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 OR51M1Q9H341 326 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 FAM212BQ9NTI7 297 aaPredicted RBP11.94□□□□□ -0.5
GGA3-214ENST00000582717 C14orf166Q9Y224 244 aaKnown RBP11.94□□□□□ -0.5
GGA3-214ENST00000582717 NCOR1O75376 2440 aa11.94□□□□□ -0.5
GGA3-214ENST00000582717 SDK2Q58EX2 2172 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 IFNA2P01563 188 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 LIFP15018 202 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 OTX2P32243 289 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 RBMXP38159 391 aaKnown RBP11.93□□□□□ -0.5
GGA3-214ENST00000582717 ZNF84P51523 738 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 TMEM50BP56557 158 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 Q0VFX4 171 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 TMEM156Q8N614 296 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 UBAC2Q8NBM4 344 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 OR9K2Q8NGE7 335 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 OR51E1Q8TCB6 317 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 CT55Q8WUE5 264 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 ARHGAP5-AS1Q96IT6 56 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 PLEKHA2Q9HB19 425 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 PRR13Q9NZ81 148 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 FBXL17Q9UF56 701 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 HDGFL3Q9Y3E1 203 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 ZNF878C9JN71 531 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 TSPAN15O95858 294 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 SFTPBP07988 381 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 HOXB5P09067 269 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 OR8U9P0C7N5 309 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 FCGR2CP31995 323 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 OR3A4PP47883 348 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 UCP2P55851 309 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 CLRN1P58418 232 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 CSNK2A1P68400 391 aaPredicted RBP11.93□□□□□ -0.5
GGA3-214ENST00000582717 ARL6IP1Q15041 203 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 FAM209BQ5JX69 171 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 CARD17Q5XLA6 110 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 CSNK2A3Q8NEV1 391 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 OR10S1Q8NGN2 331 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 OR8U1Q8NH10 309 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 FNDC9Q8TBE3 224 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 SECTM1Q8WVN6 248 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 JSRP1Q96MG2 331 aaPredicted RBP11.93□□□□□ -0.5
GGA3-214ENST00000582717 OR10A2Q9H208 303 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 RGCCQ9H4X1 137 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 NIT2Q9NQR4 276 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 EHFQ9NZC4 300 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 GHRLQ9UBU3 117 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 TUBD1Q9UJT1 453 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 TCFL5Q9UL49 500 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 PADI1Q9ULC6 663 aa11.93□□□□□ -0.5
GGA3-214ENST00000582717 A0A087WZY1 265 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms