RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PGA5P0DJD9 388 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 GABRB1P18505 474 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 KIR3DL2P43630 455 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 COMPP49747 757 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-220ENST00000581707 DEFB112Q30KQ8 113 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 RUSC1-AS1Q66K80 236 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 ACP7Q6ZNF0 438 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 ENTHD1Q8IYW4 607 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 ACBD7Q8N6N7 88 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 OR2G2Q8NGZ5 317 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 RHOXF1Q8NHV9 184 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 C8orf46Q8TAG6 207 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 GATAD2BQ8WXI9 593 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 STMN2Q93045 179 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 LHX4Q969G2 390 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 ZDHHC16Q969W1 377 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 RNF166Q96A37 237 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-220ENST00000581707 SLC25A28Q96A46 364 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 LGALS12Q96DT0 336 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 ZNF488Q96MN9 340 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 FAM118AQ9NWS6 357 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 ZNF222Q9UK12 451 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 SLC7A11Q9UPY5 501 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 EXOGQ9Y2C4 368 aaKnown RBP16.08■□□□□ 0.16
SREBF1-220ENST00000581707 POLDIP2Q9Y2S7 368 aa16.08■□□□□ 0.16
SREBF1-220ENST00000581707 IGHV1-69DA0A0B4J2H0 117 aa16.07■□□□□ 0.16
SREBF1-220ENST00000581707 CLDN34H7C241 214 aa16.07■□□□□ 0.16
SREBF1-220ENST00000581707 NOS1APO75052 506 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-220ENST00000581707 IGHV1-69P01742 117 aa16.07■□□□□ 0.16
SREBF1-220ENST00000581707 NDUFB7P17568 137 aa16.07■□□□□ 0.16
SREBF1-220ENST00000581707 CAV3P56539 151 aa16.07■□□□□ 0.16
SREBF1-220ENST00000581707 OR12D2P58182 307 aa16.07■□□□□ 0.16
SREBF1-220ENST00000581707 SLC9A3R2Q15599 337 aa16.07■□□□□ 0.16
SREBF1-220ENST00000581707 SMIM21Q3B7S5 101 aa16.07■□□□□ 0.16
SREBF1-220ENST00000581707 ANGPTL5Q86XS5 388 aa16.07■□□□□ 0.16
SREBF1-220ENST00000581707 CMTM4Q8IZR5 234 aa16.07■□□□□ 0.16
SREBF1-220ENST00000581707 RDH10Q8IZV5 341 aa16.07■□□□□ 0.16
SREBF1-220ENST00000581707 TRMT10AQ8TBZ6 339 aaKnown RBP16.07■□□□□ 0.16
SREBF1-220ENST00000581707 Q96MT0 163 aa16.07■□□□□ 0.16
SREBF1-220ENST00000581707 PRDM13Q9H4Q3 707 aa16.07■□□□□ 0.16
SREBF1-220ENST00000581707 LOC107986453A0A1B0GWG9 222 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 FAM230AA0A1W2PPH8 454 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 RFPL4AA6NLU0 287 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 RFPL4AL1F8VTS6 287 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 SERPINA3P01011 423 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 RNASE1P07998 156 aaKnown RBP16.06■□□□□ 0.16
SREBF1-220ENST00000581707 DBTP11182 482 aaKnown RBP16.06■□□□□ 0.16
SREBF1-220ENST00000581707 MPZP25189 248 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 ZNF91Q05481 1191 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 UBE2V2Q15819 145 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 TMEM244Q5VVB8 128 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 FDX2Q6P4F2 183 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 VMO1Q7Z5L0 202 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 KIR3DL3Q8N743 410 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 ZNRF1Q8ND25 227 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 NPRL2Q8WTW4 380 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 C10orf35Q96D05 121 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 SDSLQ96GA7 329 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 FRRS1LQ9P0K9 344 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-220ENST00000581707 MAB21L2Q9Y586 359 aa16.06■□□□□ 0.16
SREBF1-220ENST00000581707 J3QLW9 94 aa16.05■□□□□ 0.16
SREBF1-220ENST00000581707 GATBO75879 557 aaKnown RBP16.05■□□□□ 0.16
SREBF1-220ENST00000581707 NXPH2O95156 264 aa16.05■□□□□ 0.16
SREBF1-220ENST00000581707 HKR1P10072 659 aa16.05■□□□□ 0.16
SREBF1-220ENST00000581707 ZNF19P17023 458 aa16.05■□□□□ 0.16
SREBF1-220ENST00000581707 CALHM1Q8IU99 346 aa16.05■□□□□ 0.16
SREBF1-220ENST00000581707 TMEM185AQ8NFB2 350 aa16.05■□□□□ 0.16
SREBF1-220ENST00000581707 MRPL48Q96GC5 212 aaKnown RBP16.05■□□□□ 0.16
SREBF1-220ENST00000581707 MYCBPQ99417 103 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-220ENST00000581707 NRIP2Q9BQI9 281 aa16.05■□□□□ 0.16
SREBF1-220ENST00000581707 PKIBQ9C010 78 aa16.05■□□□□ 0.16
SREBF1-220ENST00000581707 CHST5Q9GZS9 411 aa16.05■□□□□ 0.16
SREBF1-220ENST00000581707 AMBNQ9NP70 447 aa16.05■□□□□ 0.16
SREBF1-220ENST00000581707 NOX4Q9NPH5 578 aa16.05■□□□□ 0.16
SREBF1-220ENST00000581707 HOXA3O43365 443 aaPredicted RBP16.04■□□□□ 0.16
SREBF1-220ENST00000581707 FADS2O95864 444 aaKnown RBP16.04■□□□□ 0.16
SREBF1-220ENST00000581707 ISG15P05161 165 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 HTR1AP08908 422 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 CFPP27918 469 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 PRDX2P32119 198 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 FUT6P51993 359 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 CAPZA1P52907 286 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 NANOS3P60323 173 aaKnown RBP16.04■□□□□ 0.16
SREBF1-220ENST00000581707 ACTA2P62736 377 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 ACTG2P63267 376 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 IL24Q13007 206 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 GALEQ14376 348 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 ZSCAN26Q16670 478 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 Q6YL49 198 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 LHFPL3Q86UP9 236 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 PDZD9Q8IXQ8 264 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 CD177Q8N6Q3 437 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 C3orf56Q8N813 242 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 ZNF555Q8NEP9 628 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 PP6455Q8WZ26 134 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 PELI1Q96FA3 418 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 C4orf36Q96KX1 117 aa16.04■□□□□ 0.16
SREBF1-220ENST00000581707 ELL3Q9HB65 397 aaPredicted RBP16.04■□□□□ 0.16
SREBF1-220ENST00000581707 A0A1W2PQ09 198 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms