RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 NPFFR1Q9GZQ6 430 aa8.6□□□□□ -1.03
RFFL-209ENST00000581265 TAS2R1Q9NYW7 299 aa8.6□□□□□ -1.03
RFFL-209ENST00000581265 SLC1A7O00341 560 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 GSC2O15499 205 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 CHST1O43916 411 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 E2F6O75461 281 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 PGA5P0DJD9 388 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 HOXB6P17509 224 aaKnown RBP8.59□□□□□ -1.03
RFFL-209ENST00000581265 PAX6P26367 422 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 CAPZA1P52907 286 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 RPS7P62081 194 aaKnown RBP8.59□□□□□ -1.03
RFFL-209ENST00000581265 SMIM21Q3B7S5 101 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 LCN1P1Q5VSP4 162 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 MOB3CQ70IA8 216 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 ZNF573Q86YE8 665 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 ZNF679Q8IYX0 411 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 ADGRG5Q8IZF4 528 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 C11orf44Q8N8P7 122 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 BBS1Q8NFJ9 593 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 OR2T27Q8NH04 317 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 OR51E1Q8TCB6 317 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 PPP1R14AQ96A00 147 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 CLPTM1LQ96KA5 538 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 PBOV1Q9GZY1 135 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 ZNF556Q9HAH1 456 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 GPR84Q9NQS5 396 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 USE1Q9NZ43 259 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 NUFIP1Q9UHK0 495 aaKnown RBP8.59□□□□□ -1.03
RFFL-209ENST00000581265 ENPP5Q9UJA9 477 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 PIGLQ9Y2B2 252 aa8.59□□□□□ -1.03
RFFL-209ENST00000581265 PSMD9O00233 223 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 DLGAP1O14490 977 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 GNGT2O14610 69 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 SYNGR1O43759 233 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 DHRS3O75911 302 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 NRASP01111 189 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 T-ENOLP0DO92 83 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 VSIG10L2P0DP72 767 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 ANXA8P13928 327 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 FAHP16930 419 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 PRKACGP22612 351 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 LGALS4P56470 323 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 GNGT1P63211 74 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 EMX1Q04741 257 aaPredicted RBP8.58□□□□□ -1.04
RFFL-209ENST00000581265 APOFQ13790 326 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 ZNF684Q5T5D7 378 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 TMEM236Q5W0B7 351 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 PLCXD3Q63HM9 321 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 TMEM42Q69YG0 159 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 Q8N2B8 174 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 CANT1Q8WVQ1 401 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 ASB17Q8WXJ9 295 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 LRGUKQ96M69 825 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 ZNF488Q96MN9 340 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 OR8B4Q96RC9 309 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 NRIP2Q9BQI9 281 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 TEX12Q9BXU0 123 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 SLC25A19Q9HC21 320 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 HES4Q9HCC6 221 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 SERTAD4Q9NUC0 356 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 TMEM14AQ9Y6G1 99 aa8.58□□□□□ -1.04
RFFL-209ENST00000581265 KMT2CQ8NEZ4 4911 aaKnown RBP8.58□□□□□ -1.04
RFFL-209ENST00000581265 PQLC2LA1A4F0 135 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 AQP12BA6NM10 295 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 C17orf98A8MV24 154 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 PRR32B1ATL7 298 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 J3QT63 122 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 SRSF10O75494 262 aaKnown RBP8.57□□□□□ -1.04
RFFL-209ENST00000581265 TTRP02766 147 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 TK1P04183 234 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 CCL3L1P16619 93 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 CALB2P22676 271 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 MPZP25189 248 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 HAAOP46952 286 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 BMXP51813 675 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 RIDAP52758 137 aaKnown RBP8.57□□□□□ -1.04
RFFL-209ENST00000581265 GYS2P54840 703 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 DLX6P56179 175 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 ERVFRD-1P60508 538 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 ERVK11-1P61568 191 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 SNAPC1Q16533 368 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 ZNF829Q3KNS6 432 aaPredicted RBP8.57□□□□□ -1.04
RFFL-209ENST00000581265 CLVS2Q5SYC1 327 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 LHFPL4Q7Z7J7 247 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 COMMD2Q86X83 199 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 AQP12AQ8IXF9 295 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 HS3ST5Q8IZT8 346 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 OR4M1Q8NGD0 313 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 WIPF2Q8TF74 440 aaPredicted RBP8.57□□□□□ -1.04
RFFL-209ENST00000581265 SGCDQ92629 289 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 MALSU1Q96EH3 234 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 C1orf21Q9H246 121 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 ZNF702PQ9H963 129 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 POLDIP2Q9Y2S7 368 aa8.57□□□□□ -1.04
RFFL-209ENST00000581265 TBL2Q9Y4P3 447 aaKnown RBP8.57□□□□□ -1.04
RFFL-209ENST00000581265 RYR3Q15413 4870 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 A0A1B0GTI1 187 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 CCDC182A6NF36 153 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 DHRS7CA6NNS2 312 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 K7N7A8 449 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms