RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 SLC25A4P12235 298 aa9.16□□□□□ -0.94
TOP3A-209ENST00000580095 CNR1P21554 472 aa9.16□□□□□ -0.94
TOP3A-209ENST00000580095 CCL1P22362 96 aa9.16□□□□□ -0.94
TOP3A-209ENST00000580095 HFEQ30201 348 aa9.16□□□□□ -0.94
TOP3A-209ENST00000580095 CHRFAM7AQ494W8 412 aa9.16□□□□□ -0.94
TOP3A-209ENST00000580095 FAM74A3Q4VXF1 159 aa9.16□□□□□ -0.94
TOP3A-209ENST00000580095 WIPI1Q5MNZ9 446 aaPredicted RBP9.16□□□□□ -0.94
TOP3A-209ENST00000580095 SLC23A3Q6PIS1 610 aa9.16□□□□□ -0.94
TOP3A-209ENST00000580095 PLEKHJ1Q9NW61 149 aa9.16□□□□□ -0.94
TOP3A-209ENST00000580095 PISDQ9UG56 409 aa9.16□□□□□ -0.94
TOP3A-209ENST00000580095 ZFHX4Q86UP3 3567 aa9.16□□□□□ -0.94
TOP3A-209ENST00000580095 A0A1B0GV90 55 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 MSTNO14793 375 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 LCATP04180 440 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 DSCR4P56555 118 aaPredicted RBP9.15□□□□□ -0.94
TOP3A-209ENST00000580095 RAB32Q13637 225 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 TSC22D1Q15714 1073 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 KCNMB1Q16558 191 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 SP6Q3SY56 376 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 TRIM61Q5EBN2 209 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 TSPO2Q5TGU0 170 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 MOB3CQ70IA8 216 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 C5orf24Q7Z6I8 188 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 SSC4DQ8WTU2 575 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 LRRC46Q96FV0 321 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 ANGPTL4Q9BY76 406 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 SLC25A32Q9H2D1 315 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 FLVCR1Q9Y5Y0 555 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 SHANK1Q9Y566 2161 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 IGKV1-27A0A075B6S5 117 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 ARGFXA6NJG6 315 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 SERPINA5P05154 406 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 ADH6P28332 368 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 GPX4P36969 197 aaPredicted RBP9.15□□□□□ -0.94
TOP3A-209ENST00000580095 SUCLG1P53597 346 aaKnown RBP9.15□□□□□ -0.94
TOP3A-209ENST00000580095 Q0VFX4 171 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 PAN3Q58A45 887 aaKnown RBP9.15□□□□□ -0.94
TOP3A-209ENST00000580095 HSD17B13Q7Z5P4 300 aaPredicted RBP9.15□□□□□ -0.94
TOP3A-209ENST00000580095 MAML2Q8IZL2 1156 aaPredicted RBP9.15□□□□□ -0.94
TOP3A-209ENST00000580095 TOMM40LQ969M1 308 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 ZNF845Q96IR2 970 aaPredicted RBP9.15□□□□□ -0.94
TOP3A-209ENST00000580095 CDX2Q99626 313 aaPredicted RBP9.15□□□□□ -0.94
TOP3A-209ENST00000580095 CDC6Q99741 560 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 LIME1Q9H400 295 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 FBLN5Q9UBX5 448 aa9.15□□□□□ -0.94
TOP3A-209ENST00000580095 FREM1Q5H8C1 2179 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 LOC102723996A0A087X1L8 192 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 SFT2D2O95562 160 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 MPZP25189 248 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 LSM6P62312 80 aaKnown RBP9.15□□□□□ -0.95
TOP3A-209ENST00000580095 MC2RQ01718 297 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 SRYQ05066 204 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 SRSF4Q08170 494 aaKnown RBP9.15□□□□□ -0.95
TOP3A-209ENST00000580095 IL11RAQ14626 422 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 PIGYQ3MUY2 71 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 TMEM88Q6PEY1 159 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 TMEM17Q86X19 198 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 OR2Y1Q8NGV0 311 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 ABHD3Q8WU67 409 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 TMEM54Q969K7 222 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 OCSTAMPQ9BR26 566 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF2Q9BSG1 426 aaPredicted RBP9.15□□□□□ -0.95
TOP3A-209ENST00000580095 CHST5Q9GZS9 411 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 PARP12Q9H0J9 701 aaKnown RBP9.15□□□□□ -0.95
TOP3A-209ENST00000580095 MED9Q9NWA0 146 aa9.15□□□□□ -0.95
TOP3A-209ENST00000580095 C3orf80F5H4A9 247 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 GPR31O00270 319 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 SCGNO76038 276 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 GP1BAP07359 652 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 RCC1P18754 421 aaPredicted RBP9.14□□□□□ -0.95
TOP3A-209ENST00000580095 CASP6P55212 293 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF345Q14585 488 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 PLEKHN1Q494U1 663 aaPredicted RBP9.14□□□□□ -0.95
TOP3A-209ENST00000580095 VAX1Q5SQQ9 334 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF585AQ6P3V2 769 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 ARRDC1Q8N5I2 433 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 SEMA6DQ8NFY4 1073 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 PIK3IP1Q96FE7 263 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF700Q9H0M5 742 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 WDR54Q9H977 334 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 DNAJC13O75165 2243 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF407Q9C0G0 2248 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 COX5BP10606 129 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 CCL2P13500 99 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 PRF1P14222 555 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF32P17041 273 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 HLA-GP17693 338 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 PTGER4P35408 488 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 CARD18P57730 90 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 FXYD4P59646 89 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 PABPC1L2AQ5JQF8 200 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 CYB5R2Q6BCY4 276 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 FAM89BQ8N5H3 189 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 TMEM105Q8N8V8 129 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 CPNE2Q96FN4 548 aaPredicted RBP9.14□□□□□ -0.95
TOP3A-209ENST00000580095 REEP6Q96HR9 211 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 GUCD1Q96NT3 240 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 NECAB3Q96P71 396 aaPredicted RBP9.14□□□□□ -0.95
TOP3A-209ENST00000580095 SMIM3Q9BZL3 60 aa9.14□□□□□ -0.95
TOP3A-209ENST00000580095 DEPPQ9NTK1 212 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms