RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 OR2W3Q7Z3T1 314 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 SCCPDHQ8NBX0 429 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 OR51D1Q8NGF3 324 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 OR51F2Q8NH61 342 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 ITLN1Q8WWA0 313 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 AQP3Q92482 292 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 PTX4Q96A99 478 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 RAB1BQ9H0U4 201 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 CST11Q9H112 138 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 PLEKHF2Q9H8W4 249 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 FN3KRPQ9HA64 309 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 SMURF1Q9HCE7 757 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 DECR2Q9NUI1 292 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 FBLN5Q9UBX5 448 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 ING4Q9UNL4 249 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 TENM4Q6N022 2769 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 A6NLC8 198 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 CLPXO76031 633 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 PLATP00750 562 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 SNRPBP14678 240 aaKnown RBP9.1□□□□□ -0.95
SS18-213ENST00000579640 SSTR2P30874 369 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 BMXP51813 675 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 RSU1Q15404 277 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 FAM189A2Q15884 450 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 C2orf76Q3KRA6 126 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 PRAMEF6Q5VXH4 476 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 LINC00299Q6ZSB3 139 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 CDH24Q86UP0 819 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 Q8IYB0 196 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 ZNF295-AS1Q8N0V1 137 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 OR10Z1Q8NGY1 313 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 KCNG3Q8TAE7 436 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 LGALS14Q8TCE9 139 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 NKX3-1Q99801 234 aaPredicted RBP9.1□□□□□ -0.95
SS18-213ENST00000579640 C6orf62Q9GZU0 229 aaPredicted RBP9.1□□□□□ -0.95
SS18-213ENST00000579640 SAP30LQ9HAJ7 183 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 COMMD3Q9UBI1 195 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 OR5V1Q9UGF6 321 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 ADAM30Q9UKF2 790 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 LAMP3Q9UQV4 416 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 PEX16Q9Y5Y5 336 aa9.1□□□□□ -0.95
SS18-213ENST00000579640 PTPN13Q12923 2485 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 DOPEY2Q9Y3R5 2298 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 TRAPPC2LH3BP13 241 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 H7C417 338 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 IFNL4K9M1U5 179 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 CDIPTO14735 213 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 LDLRAD4O15165 306 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 TPD52L2O43399 206 aaKnown RBP9.09□□□□□ -0.95
SS18-213ENST00000579640 SPRY1O43609 319 aaPredicted RBP9.09□□□□□ -0.95
SS18-213ENST00000579640 NOS1APO75052 506 aaPredicted RBP9.09□□□□□ -0.95
SS18-213ENST00000579640 KDM4BO94953 1096 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 PAHP00439 452 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 CSTBP04080 98 aaKnown RBP9.09□□□□□ -0.95
SS18-213ENST00000579640 RAB6AP20340 208 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 S100A5P33763 92 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 CFHR2P36980 270 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 C1QL2Q7Z5L3 287 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 C11orf53Q8IXP5 236 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 OR11L1Q8NGX0 322 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 Q8TCH9 128 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 NEU4Q8WWR8 484 aaPredicted RBP9.09□□□□□ -0.95
SS18-213ENST00000579640 HPS1Q92902 700 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 MRPS24Q96EL2 167 aaKnown RBP9.09□□□□□ -0.95
SS18-213ENST00000579640 C1orf147Q96MC9 270 aaPredicted RBP9.09□□□□□ -0.95
SS18-213ENST00000579640 VRK1Q99986 396 aaPredicted RBP9.09□□□□□ -0.95
SS18-213ENST00000579640 ELL3Q9HB65 397 aaPredicted RBP9.09□□□□□ -0.95
SS18-213ENST00000579640 RAB22AQ9UL26 194 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 ARFGEF3Q5TH69 2177 aa9.09□□□□□ -0.95
SS18-213ENST00000579640 A0A0B4J203 849 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 IGKV1-12A0A0C4DH73 117 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 TMEM272A0A1B0GTI8 110 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 TMEM14DPA8MWL7 114 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 RGS5O15539 181 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 SYNGR1O43759 233 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 ANGPTL7O43827 346 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 IGKV1D-12P01611 117 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 VSIG8P0DPA2 414 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 COL8A1P27658 744 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 CCL8P80075 99 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 QRFPP83859 136 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 MPPED2Q15777 294 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 ZNF181Q2M3W8 571 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 SLC22A6Q4U2R8 563 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 UBE2NLQ5JXB2 153 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 ELP2Q6IA86 826 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 WDR82Q6UXN9 313 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 MOGAT3Q86VF5 341 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 Q8NFD4 153 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 SLAMF9Q96A28 289 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 POM121Q96HA1 1249 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 CEP19Q96LK0 163 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 CACNG6Q9BXT2 260 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 GCM1Q9NP62 436 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 UFSP2Q9NUQ7 469 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 C1orf123Q9NWV4 160 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 MTCH1Q9NZJ7 389 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 USP9YO00507 2555 aaPredicted RBP9.08□□□□□ -0.96
SS18-213ENST00000579640 hCG_1807616A0A1W2PRN6 198 aa9.08□□□□□ -0.96
SS18-213ENST00000579640 LRRC30A6NM36 301 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms