RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 TGFBR2P37173 567 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 PROK1P58294 105 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ACTR3P61158 418 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 EGR3Q06889 387 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ACSM1Q08AH1 577 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ODF4Q2M2E3 257 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 SMIM21Q3B7S5 101 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 CLVS2Q5SYC1 327 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ASPHD2Q6ICH7 369 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ZNF322Q6U7Q0 402 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ACP7Q6ZNF0 438 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 MEPCEQ7L2J0 689 aaKnown RBP7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 MKXQ8IYA7 352 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 TCEANCQ8N8B7 351 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ZSCAN4Q8NAM6 433 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 POC1AQ8NBT0 407 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 OR4M1Q8NGD0 313 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 OR5D13Q8NGL4 314 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 OR5R1Q8NH85 324 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 OR5K1Q8NHB7 308 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 FAM110DQ8TAY7 271 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 RORBQ92753 470 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 TNFRSF14Q92956 283 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 APOL4Q9BPW4 351 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 MOB1AQ9H8S9 216 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 C19orf12Q9NSK7 152 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 NUFIP1Q9UHK0 495 aaKnown RBP7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ZNF222Q9UK12 451 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 OR52A1Q9UKL2 312 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 SF3B6Q9Y3B4 125 aaKnown RBP7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 PKD1L1Q8TDX9 2849 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 TRBV23-1A0A0A0MS06 115 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 A0A1W2PPH5 198 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 SLC22A31A6NKX4 558 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 G3V2T6 193 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 J3QT63 122 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 INMTO95050 263 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 NXPH2O95156 264 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 TSPAN15O95858 294 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 IGLV3-1P01715 115 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 PIPP12273 146 aaPredicted RBP7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 COX7A1P24310 79 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 PRDX2P32119 198 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 RPL31P62899 125 aaKnown RBP7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 ROM1Q03395 351 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 ZBTB37Q5TC79 503 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 SLC35E4Q6ICL7 350 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 FAHD1Q6P587 224 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 C1orf122Q6ZSJ8 110 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 ZNF573Q86YE8 665 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 ZNF561Q8N587 486 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 CD177Q8N6Q3 437 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 TRMT10AQ8TBZ6 339 aaKnown RBP7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 TMEM163Q8TC26 289 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 C17orf50Q8WW18 174 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 SLC7A6OSQ96CW6 309 aaPredicted RBP7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 NRBF2Q96F24 287 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 SDSLQ96GA7 329 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 IL4I1Q96RQ9 567 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 SSX3Q99909 188 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 C16orf95Q9H693 158 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 PLEKHA1Q9HB21 404 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 RASL12Q9NYN1 266 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 POLDIP2Q9Y2S7 368 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 R4GMQ9 66 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 CMYA5Q8N3K9 4069 aa7.52□□□□□ -1.21
CDK5RAP3-211ENST00000578996 FAM230AA0A1W2PPH8 454 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 MEX3AA1L020 520 aaKnown RBP7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 DLGAP1O14490 977 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 APOL3O95236 402 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 KRT8P05787 483 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 PGA5P0DJD9 388 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 CCL3L1P16619 93 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 EPHA2P29317 976 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 GABRA5P31644 462 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 BMXP51813 675 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 LGALS4P56470 323 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 ERVFRD-1P60508 538 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 C2orf68Q2NKX9 166 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 LRRC75BQ2VPJ9 315 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 PLA1AQ53H76 456 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 SLX4IPQ5VYV7 408 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 NXNL2Q5VZ03 156 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 HIST2H2BDQ6DRA6 164 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 ZNF782Q6ZMW2 699 aaPredicted RBP7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 ANGPTL5Q86XS5 388 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 C1QL4Q86Z23 238 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 ZDHHC13Q8IUH4 622 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 GID4Q8IVV7 300 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 YIPF7Q8N8F6 280 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 C11orf44Q8N8P7 122 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 ASCC1Q8N9N2 400 aaKnown RBP7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 BEND2Q8NDZ0 799 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 OR14K1Q8NGZ2 314 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 OR2T27Q8NH04 317 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 UTP4Q969X6 686 aaKnown RBP7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 NKX3-1Q99801 234 aaPredicted RBP7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 FAM234AQ9H0X4 552 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 ADGRL4Q9HBW9 690 aa7.51□□□□□ -1.21
CDK5RAP3-211ENST00000578996 CLN6Q9NWW5 311 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms