RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 NF1P21359 2839 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 SVEP1Q4LDE5 3571 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 IGHV4-61A0A0C4DH41 118 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 A0A0G2JK05 382 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 IGHV1-69-2A0A0G2JMI3 117 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 TRBV2A0A0J9YWF9 115 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 IGHV3-64DA0A0J9YX35 117 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 A0A1B0GW55 424 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 ANKRD61A6NGH8 418 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 GGT3PA6NGU5 568 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 A6NIN4 97 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 OR5B21A6NL26 309 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF850A8MQ14 1090 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 SRRM5B3KS81 715 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 F8VVB4 439 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 F8VWA3 439 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 TMEM178BH3BS89 294 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 H3BSH0 61 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 NDUFS8O00217 210 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 SYT7O43581 403 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 SSX4O60224 188 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 NOS1APO75052 506 aaPredicted RBP3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 RHBDL1O75783 438 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 INMTO95050 263 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 TFAP2AP05549 437 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 ACAA1P09110 424 aaPredicted RBP3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 UCHL1P09936 223 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 DUX4L2P0CJ85 424 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 DUX4L3P0CJ86 424 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 DUX4L4P0CJ87 422 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 DUX4L5P0CJ88 424 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 DUX4L6P0CJ89 424 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 DUX4L7P0CJ90 424 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 PGA5P0DJD9 388 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 MYL12AP19105 171 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 CELP19835 753 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 ATP6V1E1P36543 226 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 NR4A2P43354 598 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 ALDH3B2P48448 385 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 CHN2P52757 468 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 GBX2P52951 348 aaPredicted RBP3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 TAS2R43P59537 309 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 RPS25P62851 125 aaKnown RBP3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 TNFAIP6P98066 277 aaPredicted RBP3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 DGCR2P98153 550 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 FABP5Q01469 135 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 PAX2Q02962 417 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 RIPPLY1Q0D2K3 151 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 GPR50Q13585 617 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 ZMYND11Q15326 602 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 TSTQ16762 297 aaKnown RBP3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 CLEC12BQ2HXU8 276 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 ODF4Q2M2E3 257 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 GFOD2Q3B7J2 385 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 CEACAM21Q3KPI0 293 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 ZMAT1Q5H9K5 638 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 CEP78Q5JTW2 689 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 PRR31Q5SQ13 230 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 FAM201AQ5SY85 155 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 CLVS2Q5SYC1 327 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 TMEM244Q5VVB8 128 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 SHEQ5VZ18 495 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 TEX36Q5VZQ5 186 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 FAM166AQ6J272 317 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 DUX4L9Q6RFH8 374 aaPredicted RBP3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 ASCL4Q6XD76 172 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF841Q6ZN19 808 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF367Q7RTV3 350 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 FAM220AQ7Z4H9 259 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 LRRTM1Q86UE6 522 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 NR2C2APQ86WQ0 139 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 ZDHHC23Q8IYP9 409 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 STX19Q8N4C7 294 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 SCCPDHQ8NBX0 429 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 CCDC54Q8NEL0 328 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 DNAAF1Q8NEP3 725 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 Q8NFD4 153 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 SEMA6DQ8NFY4 1073 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 OR2Z1Q8NG97 314 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 OR1M1Q8NGA1 313 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 OR5A2Q8NGI9 324 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 OR5AK2Q8NH90 309 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 AQP3Q92482 292 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 RDH5Q92781 318 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 MYDGFQ969H8 173 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 FGGYQ96C11 551 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 C10orf35Q96D05 121 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 YIPF6Q96EC8 236 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 SEH1LQ96EE3 360 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 Q96MF0 132 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 OR14A2Q96R54 314 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 MGLLQ99685 303 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 VRK1Q99986 396 aaPredicted RBP3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 MND1Q9BWT6 205 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 BPESC1Q9GZL8 116 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 SLC22A4Q9H015 551 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 RAB1BQ9H0U4 201 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 METTL17Q9H7H0 456 aaPredicted RBP3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 CHODLQ9H9P2 273 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 SAP30LQ9HAJ7 183 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms