RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 LPCAT3Q6P1A2 487 aa9.61□□□□□ -0.87
SKA2-204ENST00000578519 SLC36A1Q7Z2H8 476 aa9.61□□□□□ -0.87
SKA2-204ENST00000578519 FAM169BQ8N8A8 192 aa9.61□□□□□ -0.87
SKA2-204ENST00000578519 C9orf106Q8NAJ2 232 aa9.61□□□□□ -0.87
SKA2-204ENST00000578519 TERB2Q8NHR7 220 aa9.61□□□□□ -0.87
SKA2-204ENST00000578519 GRPEL2Q8TAA5 225 aa9.61□□□□□ -0.87
SKA2-204ENST00000578519 ZFAND1Q8TCF1 268 aa9.61□□□□□ -0.87
SKA2-204ENST00000578519 WBP1Q96G27 269 aa9.61□□□□□ -0.87
SKA2-204ENST00000578519 RTL8AQ9BWD3 113 aa9.61□□□□□ -0.87
SKA2-204ENST00000578519 BEX2Q9BXY8 128 aa9.61□□□□□ -0.87
SKA2-204ENST00000578519 TINAGL1Q9GZM7 467 aaPredicted RBP9.61□□□□□ -0.87
SKA2-204ENST00000578519 BEX1Q9HBH7 125 aa9.61□□□□□ -0.87
SKA2-204ENST00000578519 POU2F3Q9UKI9 436 aa9.61□□□□□ -0.87
SKA2-204ENST00000578519 MSRB2Q9Y3D2 182 aa9.61□□□□□ -0.87
SKA2-204ENST00000578519 PTPRBP23467 1997 aa9.61□□□□□ -0.87
SKA2-204ENST00000578519 OTOGLQ3ZCN5 2332 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 PHF3Q92576 2039 aaKnown RBP9.6□□□□□ -0.87
SKA2-204ENST00000578519 A0A0A6YYD4 124 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 FABP7O15540 132 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 GFRA3O60609 400 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 PDCD6O75340 191 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 RAD51DO75771 328 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 GLAP06280 429 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 ZNF735P0CB33 412 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 ANXA7P20073 488 aaKnown RBP9.6□□□□□ -0.87
SKA2-204ENST00000578519 COX5AP20674 150 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 FUT3P21217 361 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 GABRR1P24046 479 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 DNASE1P24855 282 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 HRH1P35367 487 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 TIMP3P35625 211 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 SNU13P55769 128 aaKnown RBP9.6□□□□□ -0.87
SKA2-204ENST00000578519 ARPC4P59998 168 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 PPP1CBP62140 327 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 FGL1Q08830 312 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 SURF2Q15527 256 aaPredicted RBP9.6□□□□□ -0.87
SKA2-204ENST00000578519 MPV17LQ2QL34 196 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 PLAC9Q5JTB6 97 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 ELP2Q6IA86 826 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 FBXW12Q6X9E4 464 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 SSX8Q7RTT4 187 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 C1QL2Q7Z5L3 287 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 PEG10Q86TG7 708 aaKnown RBP9.6□□□□□ -0.87
SKA2-204ENST00000578519 CD163Q86VB7 1156 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 SLC25A42Q86VD7 318 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 Q8IYB0 196 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 GCNT2Q8N0V5 402 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 C12orf45Q8N5I9 185 aaPredicted RBP9.6□□□□□ -0.87
SKA2-204ENST00000578519 SPERTQ8NA61 448 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 Q8NFD4 153 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 BEST4Q8NFU0 473 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 OR5AP2Q8NGF4 316 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 OR10K1Q8NGX5 313 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 ST8SIA4Q92187 359 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 SLC6A7Q99884 636 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 CMSS1Q9BQ75 279 aaKnown RBP9.6□□□□□ -0.87
SKA2-204ENST00000578519 SEC22CQ9BRL7 303 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 ST6GALNAC5Q9BVH7 336 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 BCL2L14Q9BZR8 327 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 PKIBQ9C010 78 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 PPA2Q9H2U2 334 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 RIMS4Q9H426 269 aaPredicted RBP9.6□□□□□ -0.87
SKA2-204ENST00000578519 POFUT1Q9H488 388 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 ST3GAL6Q9Y274 331 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 POLDIP2Q9Y2S7 368 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 SPEF1Q9Y4P9 236 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 NPTNQ9Y639 398 aa9.6□□□□□ -0.87
SKA2-204ENST00000578519 POM121CA8CG34 1229 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 FOXI3A8MTJ6 420 aaPredicted RBP9.59□□□□□ -0.87
SKA2-204ENST00000578519 ZNF732B4DXR9 585 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 PRRG2O14669 202 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 SPRY1O43609 319 aaPredicted RBP9.59□□□□□ -0.87
SKA2-204ENST00000578519 SSX5O60225 188 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 PMP2P02689 132 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 HPXP02790 462 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 CSN2P05814 226 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 OR4E1P0C645 316 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 CCL2P13500 99 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 ZNF14P17017 642 aaPredicted RBP9.59□□□□□ -0.87
SKA2-204ENST00000578519 IL32P24001 234 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 NKX2-5P52952 324 aaPredicted RBP9.59□□□□□ -0.87
SKA2-204ENST00000578519 RBPJQ06330 500 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 NKPD1Q17RQ9 610 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 C3orf36Q3SXR2 165 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 PLEKHN1Q494U1 663 aaPredicted RBP9.59□□□□□ -0.87
SKA2-204ENST00000578519 NHLRC3Q5JS37 347 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 NKAPLQ5M9Q1 402 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 TMEM211Q6ICI0 200 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 SLC25A26Q70HW3 274 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 BHLHA15Q7RTS1 189 aaPredicted RBP9.59□□□□□ -0.87
SKA2-204ENST00000578519 TMED4Q7Z7H5 227 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 GVQW1Q8N7I0 195 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 RBMXL3Q8N7X1 1067 aaKnown RBP9.59□□□□□ -0.87
SKA2-204ENST00000578519 ZNF611Q8N823 705 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 ASCC1Q8N9N2 400 aaKnown RBP9.59□□□□□ -0.87
SKA2-204ENST00000578519 OR4S1Q8NGB4 309 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 OR11H7Q8NGC8 314 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 OR4D10Q8NGI6 311 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 TAAR6Q96RI8 345 aa9.59□□□□□ -0.87
SKA2-204ENST00000578519 PHB2Q99623 299 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms