RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 DUX4L6P0CJ89 424 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 DUX4L7P0CJ90 424 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 KLRD1Q13241 179 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 DUX4L9Q6RFH8 374 aaPredicted RBP9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 C1QL4Q86Z23 238 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 OR6K6Q8NGW6 343 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 OR6N2Q8NGY6 317 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 OR4Q3Q8NH05 313 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 TEX47Q8TBZ9 253 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 HPSE2Q8WWQ2 592 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 MALSU1Q96EH3 234 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 ACTR3BQ9P1U1 418 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 DUX4Q9UBX2 424 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 POLDIP2Q9Y2S7 368 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 ZNF850A8MQ14 1090 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 SLC1A7O00341 560 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 SASH3O75995 380 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 GASTP01350 101 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 PSG2P11465 335 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 LGALS4P56470 323 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 FAM189A2Q15884 450 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 PDZD9Q8IXQ8 264 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 AQP11Q8NBQ7 271 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 WFDC9Q8NEX5 89 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 MRAPQ8TCY5 172 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 RPL3LQ92901 407 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 CIB1Q99828 191 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 BTBD10Q9BSF8 475 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 PRSS22Q9GZN4 317 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 WNT10AQ9GZT5 417 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 MOB1AQ9H8S9 216 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 DNAJB9Q9UBS3 223 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 TCF19Q9Y242 345 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 IGKV1D-17A0A075B6S4 117 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 MEGF11A6BM72 1044 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 DHRS7CA6NNS2 312 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 C17orf98A8MV24 154 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 ANGPTL7O43827 346 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 IGLV3-1P01715 115 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 HMGN1P05114 100 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 ANOS1P23352 680 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 RPS27P42677 84 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 POLR2GP62487 172 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 HOXA4Q00056 320 aaPredicted RBP9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 MINOS1Q5TGZ0 78 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 KCTD8Q6ZWB6 473 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 ERI1Q8IV48 349 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 FGFRL1Q8N441 504 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 RNF148Q8N7C7 305 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 CCDC54Q8NEL0 328 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 OR13D1Q8NGV5 346 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 RPS4Y2Q8TD47 263 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 SEMA6AQ9H2E6 1030 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 REEP1Q9H902 201 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 ZNF702PQ9H963 129 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 MINOS1-NBL1R4GNA1 71 aa9.12□□□□□ -0.95
SMARCE1-214ENST00000578112 A6NDX4 124 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 GSTT2P0CG29 244 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 GSTT2BP0CG30 244 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 CNN3Q15417 329 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 Q3ZCU0 254 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 KCTD18Q6PI47 426 aaPredicted RBP9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 ACP7Q6ZNF0 438 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 THAP5Q7Z6K1 395 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 SLC51BQ86UW2 128 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 ZNF573Q86YE8 665 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 FAM185AQ8N0U4 392 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 OR9Q2Q8NGE9 314 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 ASB17Q8WXJ9 295 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 AQP3Q92482 292 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 PIGCQ92535 297 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 MNTQ99583 582 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 TEX12Q9BXU0 123 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 ABCB10Q9NRK6 738 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 ENPP5Q9UJA9 477 aa9.11□□□□□ -0.95
SMARCE1-214ENST00000578112 ODF3BA8MYP8 253 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 ANKRD65E5RJM6 399 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 J3QT63 122 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 F2RL2O00254 374 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 EBAG9O00559 213 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 RIPPLY1Q0D2K3 151 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 HIST2H2BDQ6DRA6 164 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 ZBTB49Q6ZSB9 765 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 Q6ZSR3 168 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 TMEM185AQ8NFB2 350 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 OR11H6Q8NGC7 330 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 OR51L1Q8NGJ5 315 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 PPP1R35Q8TAP8 253 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 DNAJC9Q8WXX5 260 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 SERTAD4Q9NUC0 356 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 ZNF319Q9P2F9 582 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 PLXNB1O43157 2135 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 ACKR3P25106 362 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 GABRA2P47869 451 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 RPL31P62899 125 aaKnown RBP9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 POU4F2Q12837 409 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 ZNF829Q3KNS6 432 aaPredicted RBP9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 OR2T5Q6IEZ7 315 aa9.1□□□□□ -0.95
SMARCE1-214ENST00000578112 LCN8Q6JVE9 175 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms