RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 A0A1W2PRV1 198 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 PQLC2LA1A4F0 135 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 LOC110117498-PIK3R3F6TDL0 507 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 M0QZ24 198 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 RHBDL1O75783 438 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 RBP4P02753 201 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 OR2T7P0C7T2 308 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 OMGP23515 440 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 FASP25445 335 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 SAA4P35542 130 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 TAF9Q16594 264 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 LIAT1Q6ZQX7 453 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 EGFL6Q8IUX8 553 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 FGFRL1Q8N441 504 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 OR5T2Q8NGG2 359 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 OR2T27Q8NH04 317 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 NRIP2Q9BQI9 281 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 CDCA4Q9BXL8 241 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 PKIBQ9C010 78 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 MMP27Q9H306 513 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 FBLN5Q9UBX5 448 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 COPS3Q9UNS2 423 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 PIGLQ9Y2B2 252 aa11.86□□□□□ -0.51
SMARCE1-213ENST00000578044 A0A1B0GTI1 187 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 PRR32B1ATL7 298 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 ZNF670-ZNF695F2Z2N8 137 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 SLC1A7O00341 560 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 SELLP14151 372 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 FAHP16930 419 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 HCCSP53701 268 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 CXCR4P61073 352 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 ERVK11-1P61568 191 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 ELF3P78545 371 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 IL24Q13007 206 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 PLCXD3Q63HM9 321 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 HAGHLQ6PII5 290 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 SLC35F2Q8IXU6 374 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 OR14K1Q8NGZ2 314 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 TRUB1Q8WWH5 349 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 H1FXQ92522 213 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 RANBP3Q9H6Z4 567 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 HEXA-AS1Q9H8Q6 139 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 RAB18Q9NP72 206 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 SIRT7Q9NRC8 400 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 SNTG1Q9NSN8 517 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 OR52A1Q9UKL2 312 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 IKZF2Q9UKS7 526 aa11.85□□□□□ -0.51
SMARCE1-213ENST00000578044 A0A1W2PQ09 198 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 PAHP00439 452 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 NDUFB7P17568 137 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 HTR1FP30939 366 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 CEP78Q5JTW2 689 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 BCL2L15Q5TBC7 163 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 BRICD5Q6PL45 260 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 Q6ZSV7 163 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 MOB3CQ70IA8 216 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 COMMD2Q86X83 199 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 TCEANCQ8N8B7 351 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 ZNRF1Q8ND25 227 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 OR8J1Q8NGP2 316 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 RFKQ969G6 155 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 GABARAPL3Q9BY60 117 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 USE1Q9NZ43 259 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 MRM2Q9UI43 246 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 AP4S1Q9Y587 144 aa11.84□□□□□ -0.51
SMARCE1-213ENST00000578044 RFPL4AA6NLU0 287 aa11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 VGLL3A8MV65 326 aa11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 RFPL4AL1F8VTS6 287 aa11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 KRT8P05787 483 aa11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 MRPL3P09001 348 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 PRDX2P32119 198 aa11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 HAAOP46952 286 aa11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 GABRA2P47869 451 aa11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 RPL31P62899 125 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 MFGE8Q08431 387 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 SLC25A30Q5SVS4 291 aa11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 DHRS7BQ6IAN0 325 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 HCP5Q6MZN7 132 aa11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 C11orf42Q8N5U0 333 aa11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 AJUBAQ96IF1 538 aa11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 SLC22A13Q9Y226 551 aa11.83□□□□□ -0.52
SMARCE1-213ENST00000578044 MEIOCA2RUB1 952 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 FAM90A8PA6NJQ4 464 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 H0YAE9 185 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 K7N7A8 449 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 PSMD9O00233 223 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 RPSAP08865 295 aaKnown RBP11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 EPHA2P29317 976 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 KIR2DS4P43632 304 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 ISL1P61371 349 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 TMEM200BQ69YZ2 307 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 ASPHD2Q6ICH7 369 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 CRIP3Q6Q6R5 217 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 KCTD20Q7Z5Y7 419 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 CATSPERDQ86XM0 798 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 Q8IYB0 196 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 CD177Q8N6Q3 437 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 DNAAF1Q8NEP3 725 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 TMEM185AQ8NFB2 350 aa11.82□□□□□ -0.52
SMARCE1-213ENST00000578044 PP6455Q8WZ26 134 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms