RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 SMN1Q16637 294 aaKnown RBP13.28□□□□□ -0.28
VAPA-204ENST00000577901 C16orf87Q6PH81 154 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 ZNF573Q86YE8 665 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 C8orf59Q8N0T1 100 aaPredicted RBP13.28□□□□□ -0.28
VAPA-204ENST00000577901 CNIH3Q8TBE1 160 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 HAVCR2Q8TDQ0 301 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 RAB40AQ8WXH6 277 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 C12orf43Q96C57 262 aaKnown RBP13.28□□□□□ -0.28
VAPA-204ENST00000577901 C10orf35Q96D05 121 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 PELI1Q96FA3 418 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 TECTBQ96PL2 329 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 FGF23Q9GZV9 251 aaPredicted RBP13.28□□□□□ -0.28
VAPA-204ENST00000577901 FGF20Q9NP95 211 aaPredicted RBP13.28□□□□□ -0.28
VAPA-204ENST00000577901 GPR173Q9NS66 373 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 NKX1-2Q9UD57 310 aaPredicted RBP13.28□□□□□ -0.28
VAPA-204ENST00000577901 SLC7A11Q9UPY5 501 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 IGHV3OR15-7A0A075B7D8 119 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 TRAV40A0A0B4J280 105 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 IGHV2-70DA0A0C4DH43 119 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 MDFIC2A0A1B0GVS7 189 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 ANKRD61A6NGH8 418 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 SRRM5B3KS81 715 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 H0YHG0 523 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 H3BSH0 61 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 TNFRSF13BO14836 293 aaPredicted RBP13.27□□□□□ -0.29
VAPA-204ENST00000577901 GATBO75879 557 aaKnown RBP13.27□□□□□ -0.29
VAPA-204ENST00000577901 OMGP23515 440 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 DCKP27707 260 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 KIR3DL2P43630 455 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 GBX2P52951 348 aaPredicted RBP13.27□□□□□ -0.29
VAPA-204ENST00000577901 MIDNQ504T8 468 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 DMRTC1Q5HYR2 192 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 CD276Q5ZPR3 534 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 WDR25Q64LD2 544 aaPredicted RBP13.27□□□□□ -0.29
VAPA-204ENST00000577901 HAGHLQ6PII5 290 aaPredicted RBP13.27□□□□□ -0.29
VAPA-204ENST00000577901 FAM90A1Q86YD7 464 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 RDH10Q8IZV5 341 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 ISG20L2Q9H9L3 353 aaKnown RBP13.27□□□□□ -0.29
VAPA-204ENST00000577901 DNAJB11Q9UBS4 358 aa13.27□□□□□ -0.29
VAPA-204ENST00000577901 LOC107986453A0A1B0GWG9 222 aa13.26□□□□□ -0.29
VAPA-204ENST00000577901 HOXA3O43365 443 aaPredicted RBP13.26□□□□□ -0.29
VAPA-204ENST00000577901 AKR7A2O43488 359 aa13.26□□□□□ -0.29
VAPA-204ENST00000577901 VWFP04275 2813 aa13.26□□□□□ -0.29
VAPA-204ENST00000577901 MYL12AP19105 171 aa13.26□□□□□ -0.29
VAPA-204ENST00000577901 GLRA1P23415 457 aa13.26□□□□□ -0.29
VAPA-204ENST00000577901 NANOS3P60323 173 aaKnown RBP13.26□□□□□ -0.29
VAPA-204ENST00000577901 GMFBP60983 142 aa13.26□□□□□ -0.29
VAPA-204ENST00000577901 MED21Q13503 144 aa13.26□□□□□ -0.29
VAPA-204ENST00000577901 ALKBH1Q13686 389 aaKnown RBP13.26□□□□□ -0.29
VAPA-204ENST00000577901 ZNF841Q6ZN19 808 aa13.26□□□□□ -0.29
VAPA-204ENST00000577901 SLC36A1Q7Z2H8 476 aa13.26□□□□□ -0.29
VAPA-204ENST00000577901 DACT3Q96B18 629 aaPredicted RBP13.26□□□□□ -0.29
VAPA-204ENST00000577901 JAM3Q9BX67 310 aa13.26□□□□□ -0.29
VAPA-204ENST00000577901 KAAG1Q9UBP8 84 aa13.26□□□□□ -0.29
VAPA-204ENST00000577901 HHLA2Q9UM44 414 aa13.26□□□□□ -0.29
VAPA-204ENST00000577901 POLDIP2Q9Y2S7 368 aa13.26□□□□□ -0.29
VAPA-204ENST00000577901 MMP24Q9Y5R2 645 aa13.26□□□□□ -0.29
VAPA-204ENST00000577901 KIR2DS1A0A191URI9 304 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 PQLC2LA1A4F0 135 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 RHBDL1O75783 438 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 CCDC159P0C7I6 412 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 HAAOP46952 286 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 DEFB112Q30KQ8 113 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 BRD3OSQ6XYD6 125 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 TMPRSS11AQ6ZMR5 421 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 ZNF676Q8N7Q3 588 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 PP6455Q8WZ26 134 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 AQP3Q92482 292 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 TFAP2CQ92754 450 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 ZDHHC16Q969W1 377 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 ZNF649Q9BS31 505 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 CHST5Q9GZS9 411 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 DNTTIP1Q9H147 329 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 CHCHD3Q9NX63 227 aaKnown RBP13.25□□□□□ -0.29
VAPA-204ENST00000577901 RASL12Q9NYN1 266 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 CTSZQ9UBR2 303 aa13.25□□□□□ -0.29
VAPA-204ENST00000577901 FAM230AA0A1W2PPH8 454 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 OR4C45A6NMZ5 311 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 H0YJX3 145 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.24□□□□□ -0.29
VAPA-204ENST00000577901 DVL1O14640 695 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 KNG1P01042 644 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 GNAO1P09471 354 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 LIMS3P0CW19 117 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 LIMS4P0CW20 117 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 ZNF20P17024 532 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 TGM4P49221 684 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 FUT6P51993 359 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 SRSF4Q08170 494 aaKnown RBP13.24□□□□□ -0.29
VAPA-204ENST00000577901 CNN3Q15417 329 aaKnown RBP13.24□□□□□ -0.29
VAPA-204ENST00000577901 UBE2V2Q15819 145 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 C11orf91Q3C1V1 193 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 OR5T2Q8NGG2 359 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 FGGYQ96C11 551 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 TMEM80Q96HE8 168 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 CCL13Q99616 98 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 NUDT16L1Q9BRJ7 211 aaKnown RBP13.24□□□□□ -0.29
VAPA-204ENST00000577901 COMMD4Q9H0A8 199 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 WDR13Q9H1Z4 485 aa13.24□□□□□ -0.29
VAPA-204ENST00000577901 RASSF4Q9H2L5 321 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms