RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 ZDHHC23Q8IYP9 409 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 ZNF439Q8NDP4 499 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 APOBEC4Q8WW27 367 aaKnown RBP9.22□□□□□ -0.93
PTPRM-205ENST00000577827 APH1AQ96BI3 265 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 PECRQ9BY49 303 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 PBX4Q9BYU1 374 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 ZNF230Q9UIE0 474 aaPredicted RBP9.22□□□□□ -0.93
PTPRM-205ENST00000577827 CENPVL1A0A0U1RR11 272 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 SHISA3A0PJX4 238 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 OR2M5A3KFT3 312 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 LMO7DNF2Z398 122 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 TERTO14746 1132 aaKnown RBP9.22□□□□□ -0.93
PTPRM-205ENST00000577827 OR5AC1P0C628 307 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 RPS4Y1P22090 263 aaKnown RBP9.22□□□□□ -0.93
PTPRM-205ENST00000577827 ZBTB25P24278 435 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 GUCA2BQ16661 112 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 NECAP1Q8NC96 275 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 SPACA9Q96E40 222 aaPredicted RBP9.22□□□□□ -0.93
PTPRM-205ENST00000577827 UCK1Q9HA47 277 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 MYOZ1Q9NP98 299 aaPredicted RBP9.22□□□□□ -0.93
PTPRM-205ENST00000577827 ZNF331Q9NQX6 463 aaPredicted RBP9.22□□□□□ -0.93
PTPRM-205ENST00000577827 KIAA0100Q14667 2235 aaKnown RBP9.22□□□□□ -0.93
PTPRM-205ENST00000577827 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 C3orf85A0A1B0GTC6 90 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 CLEC18AA5D8T8 446 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 G3V3Y1 287 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 ANGPTL7O43827 346 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 CDS2O95674 445 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 TNFSF4P23510 183 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 KIR3DL2P43630 455 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 GPR3P46089 330 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 H2BFSP57053 126 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 TMEM241Q24JQ0 296 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 PHYHD1Q5SRE7 291 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 FAM162BQ5T6X4 162 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 LIAT1Q6ZQX7 453 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 CLEC18CQ8NCF0 446 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 OR1F12Q8NHA8 337 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 NRTNQ99748 197 aa9.22□□□□□ -0.93
PTPRM-205ENST00000577827 HS3ST1O14792 307 aa9.21□□□□□ -0.93
PTPRM-205ENST00000577827 RER1O15258 196 aa9.21□□□□□ -0.93
PTPRM-205ENST00000577827 PIN1P1O15428 100 aa9.21□□□□□ -0.93
PTPRM-205ENST00000577827 LAMTOR5O43504 91 aa9.21□□□□□ -0.93
PTPRM-205ENST00000577827 BGLAPP02818 100 aa9.21□□□□□ -0.93
PTPRM-205ENST00000577827 GLULP15104 373 aa9.21□□□□□ -0.93
PTPRM-205ENST00000577827 RAB4AP20338 218 aa9.21□□□□□ -0.93
PTPRM-205ENST00000577827 ROM1Q03395 351 aa9.21□□□□□ -0.93
PTPRM-205ENST00000577827 C6orf201Q7Z4U5 140 aa9.21□□□□□ -0.93
PTPRM-205ENST00000577827 FAM58AQ8N1B3 248 aa9.21□□□□□ -0.93
PTPRM-205ENST00000577827 SLC35G3Q8N808 338 aa9.21□□□□□ -0.93
PTPRM-205ENST00000577827 OR6X1Q8NH79 312 aa9.21□□□□□ -0.93
PTPRM-205ENST00000577827 UTP23Q9BRU9 249 aaKnown RBP9.21□□□□□ -0.93
PTPRM-205ENST00000577827 CALHM2Q9HA72 323 aa9.21□□□□□ -0.93
PTPRM-205ENST00000577827 ZNF236Q9UL36 1845 aa9.21□□□□□ -0.93
PTPRM-205ENST00000577827 hCG_1809904A0A1W2PP81 198 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 A0A1W2PR64 198 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 A0A1W2PRV1 198 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 SH2D1BO14796 132 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 CT45A8P0DMV1 189 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 CT45A9P0DMV2 189 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 IAPPP10997 89 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 GLB1P16278 677 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 SELEP16581 610 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 TPPP2P59282 170 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 PPP1CBP62140 327 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 TBC1D28Q2M2D7 210 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 CT45A2Q5DJT8 189 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 MOB1BQ7L9L4 216 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 EIF4E3Q8N5X7 224 aaKnown RBP9.21□□□□□ -0.94
PTPRM-205ENST00000577827 KLHDC1Q8N7A1 406 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 SIGLECL1Q8N7X8 197 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 RDH5Q92781 318 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 KLK13Q9UKR3 277 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 MYO16Q9Y6X6 1858 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 PIKFYVEQ9Y2I7 2098 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 IGKV1-8A0A0C4DH67 115 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 ZNF320A2RRD8 509 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 SOCS1O15524 211 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 SPRY1O43609 319 aaPredicted RBP9.21□□□□□ -0.94
PTPRM-205ENST00000577827 UPK3AO75631 287 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 CD8AP01732 235 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 ASAH2BP0C7U1 165 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 CYB561P49447 251 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 LSM6P62312 80 aaKnown RBP9.21□□□□□ -0.94
PTPRM-205ENST00000577827 TIGITQ495A1 244 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 HOGA1Q86XE5 327 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 RFLNBQ8N5W9 214 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 ATOH1Q92858 354 aaPredicted RBP9.21□□□□□ -0.94
PTPRM-205ENST00000577827 MCHR2Q969V1 340 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 ISOC2Q96AB3 205 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 LRRC61Q9BV99 259 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 RAB33BQ9H082 229 aa9.21□□□□□ -0.94
PTPRM-205ENST00000577827 FAM24AA6NFZ4 105 aa9.2□□□□□ -0.94
PTPRM-205ENST00000577827 ARG1P05089 322 aa9.2□□□□□ -0.94
PTPRM-205ENST00000577827 C1orf100Q5SVJ3 147 aa9.2□□□□□ -0.94
PTPRM-205ENST00000577827 PRAMEF5Q5TYX0 476 aa9.2□□□□□ -0.94
PTPRM-205ENST00000577827 PRAMEF6Q5VXH4 476 aa9.2□□□□□ -0.94
PTPRM-205ENST00000577827 OR8B12Q8NGG6 310 aa9.2□□□□□ -0.94
PTPRM-205ENST00000577827 TM4SF19Q96DZ7 209 aa9.2□□□□□ -0.94
PTPRM-205ENST00000577827 CTDSP1Q9GZU7 261 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms