RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 GGT3PA6NGU5 568 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 XRCC3O43542 346 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 GSTZ1O43708 216 aaPredicted RBP8.71□□□□□ -1.02
SS18-207ENST00000577636 LYZL6O75951 148 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 ECDO95905 644 aaPredicted RBP8.71□□□□□ -1.02
SS18-207ENST00000577636 CD8AP01732 235 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 HLA-DQB1P01920 261 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 CD37P11049 281 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 IGHV1-2P23083 117 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 GSK3AP49840 483 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 FOXG1P55316 489 aaPredicted RBP8.71□□□□□ -1.02
SS18-207ENST00000577636 BSPH1Q075Z2 132 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 GABRA6Q16445 453 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 TMEM249Q2WGJ8 235 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 ASPHD2Q6ICH7 369 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 FAM166AQ6J272 317 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 ZNF529Q6P280 563 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 Q6ZSR3 168 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 IL17RELQ6ZVW7 336 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 OR2W3Q7Z3T1 314 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 MDP1Q86V88 176 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 TOMM5Q8N4H5 51 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 DTX3Q8N9I9 347 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 CSNK2A3Q8NEV1 391 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 OR52N4Q8NGI2 321 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 OR2AE1Q8NHA4 323 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 KCNG3Q8TAE7 436 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 FAM46BQ96A09 425 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 SLC25A28Q96A46 364 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 SLC25A38Q96DW6 304 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 POM121L2Q96KW2 1035 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 LYZL4Q96KX0 146 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 HIST1H2AAQ96QV6 131 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 OR10A4Q9H209 315 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 CNTD2Q9H8S5 307 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 BARX1Q9HBU1 254 aaPredicted RBP8.71□□□□□ -1.02
SS18-207ENST00000577636 PCDHB16Q9NRJ7 776 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 ZNF224Q9NZL3 707 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 RAB22AQ9UL26 194 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 AMDHD2Q9Y303 409 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 CR1P17927 2039 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 LOC100509620A0A075B734 347 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 TMEM272A0A1B0GTI8 110 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 A0A1B0GVG6 124 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 GABARAPH6UMI1 98 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 KDM4BO94953 1096 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 NRASP01111 189 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 COX5AP20674 150 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 CDK2P24941 298 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 ATP1B3P54709 279 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 MTCP1P56278 107 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 TAS2R20P59543 309 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 GPR176Q14439 515 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 KISS1Q15726 138 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 C1QTNF12Q5T7M4 302 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 CYB5R2Q6BCY4 276 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 CLEC2AQ6UVW9 174 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 GLIPR1L1Q6UWM5 242 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 COLCA1Q6ZS62 124 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 LHFPL2Q6ZUX7 228 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 KRT74Q7RTS7 529 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 ANGPTL5Q86XS5 388 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 SMIM4Q8WVI0 70 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 SPSB4Q96A44 273 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 BORCS8Q96FH0 119 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 BOD1Q96IK1 185 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 ABHD1Q96SE0 405 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 C7orf50Q9BRJ6 194 aaKnown RBP8.7□□□□□ -1.02
SS18-207ENST00000577636 URM1Q9BTM9 101 aaKnown RBP8.7□□□□□ -1.02
SS18-207ENST00000577636 TRAF4Q9BUZ4 470 aaPredicted RBP8.7□□□□□ -1.02
SS18-207ENST00000577636 CACNG6Q9BXT2 260 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 OCEL1Q9H607 264 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 CHODLQ9H9P2 273 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 FAIMQ9NVQ4 179 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 B3GNT2Q9NY97 397 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 TAS2R8Q9NYW2 309 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 ALPK2Q86TB3 2170 aa8.7□□□□□ -1.02
SS18-207ENST00000577636 TRAV18A0A075B6X5 111 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 hCG_38984A0A1B0GV85 526 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 FAM240BA0A1B0GVZ2 78 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 ANKRD30BLA7E2S9 258 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 LYRM1O43325 122 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 CHRM2P08172 466 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 CBR1P16152 277 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 SELEP16581 610 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 SRD5A1P18405 259 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 TUBG1P23258 451 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 PRSS3P35030 304 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 FAUP35544 74 aaKnown RBP8.69□□□□□ -1.02
SS18-207ENST00000577636 RBP2P50120 134 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 FUT6P51993 359 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 FAM3AP98173 230 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 ZNF92Q03936 586 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 HGFACQ04756 655 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 OR8B8Q15620 311 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 RNASE12Q5GAN4 147 aaKnown RBP8.69□□□□□ -1.02
SS18-207ENST00000577636 PLCXD3Q63HM9 321 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 PLET1Q6UQ28 207 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 DNM1P46Q6ZS02 220 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 BHLHA15Q7RTS1 189 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms