RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 AMY2BP19961 511 aa12.78□□□□□ -0.36
SF3B3-215ENST00000577085 CAV3P56539 151 aa12.78□□□□□ -0.36
SF3B3-215ENST00000577085 ACTC1P68032 377 aa12.78□□□□□ -0.36
SF3B3-215ENST00000577085 ACTA1P68133 377 aa12.78□□□□□ -0.36
SF3B3-215ENST00000577085 ZIK1Q3SY52 487 aaPredicted RBP12.78□□□□□ -0.36
SF3B3-215ENST00000577085 MEDAGQ5VYS4 303 aa12.78□□□□□ -0.36
SF3B3-215ENST00000577085 CATSPERDQ86XM0 798 aa12.78□□□□□ -0.36
SF3B3-215ENST00000577085 POC1AQ8NBT0 407 aa12.78□□□□□ -0.36
SF3B3-215ENST00000577085 ZNRF1Q8ND25 227 aa12.78□□□□□ -0.36
SF3B3-215ENST00000577085 CCDC54Q8NEL0 328 aa12.78□□□□□ -0.36
SF3B3-215ENST00000577085 OR14K1Q8NGZ2 314 aa12.78□□□□□ -0.36
SF3B3-215ENST00000577085 USE1Q9NZ43 259 aa12.78□□□□□ -0.36
SF3B3-215ENST00000577085 IGKV1D-17A0A075B6S4 117 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 A0A0U1RQK1 487 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 A0A1B0GTI1 187 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 A0A1W2PPH5 198 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 PQLC2LA1A4F0 135 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 BTBD17A6NE02 478 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 FAM181BA6NEQ2 426 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 RFPL4AA6NLU0 287 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 RFPL4AL1F8VTS6 287 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 H0YAE9 185 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 PAHP00439 452 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 MELTFP08582 738 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 UBCP0CG48 685 aaKnown RBP12.77□□□□□ -0.37
SF3B3-215ENST00000577085 NCR3LG1Q68D85 454 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 TMEM42Q69YG0 159 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 FIP1L1Q6UN15 594 aaKnown RBP12.77□□□□□ -0.37
SF3B3-215ENST00000577085 SHISA2Q6UWI4 295 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 ACP7Q6ZNF0 438 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 FAM185AQ8N0U4 392 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 CBR4Q8N4T8 237 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 TMEM86BQ8N661 226 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 C8orf46Q8TAG6 207 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 TRMT10AQ8TBZ6 339 aaKnown RBP12.77□□□□□ -0.37
SF3B3-215ENST00000577085 NPRL2Q8WTW4 380 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 RORBQ92753 470 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 RNFT2Q96EX2 444 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 MRPL48Q96GC5 212 aaKnown RBP12.77□□□□□ -0.37
SF3B3-215ENST00000577085 HRASLS5Q96KN8 279 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 ZNF488Q96MN9 340 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 MYCBPQ99417 103 aaPredicted RBP12.77□□□□□ -0.37
SF3B3-215ENST00000577085 C9orf16Q9BUW7 83 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 DPAGT1Q9H3H5 408 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 PRDM13Q9H4Q3 707 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 METTL8Q9H825 291 aaKnown RBP12.77□□□□□ -0.37
SF3B3-215ENST00000577085 GMPPBQ9Y5P6 360 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 POMT1Q9Y6A1 747 aa12.77□□□□□ -0.37
SF3B3-215ENST00000577085 TRBV23-1A0A0A0MS06 115 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 H3BNX3 289 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 M0R1W7 72 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 SYNGR1O43759 233 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 ENTPD6O75354 484 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 FBP1P09467 338 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 OCM2P0CE71 109 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 OCMP0CE72 109 aaPredicted RBP12.76□□□□□ -0.37
SF3B3-215ENST00000577085 PGA5P0DJD9 388 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 CCL1P22362 96 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 OMGP23515 440 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 TP53I3Q53FA7 332 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 KCTD20Q7Z5Y7 419 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 BATF2Q8N1L9 274 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 ZNF561Q8N587 486 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 UBE2FQ969M7 185 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 SDSLQ96GA7 329 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 ZNF747Q9BV97 191 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 UNKLQ9H9P5 680 aaKnown RBP12.76□□□□□ -0.37
SF3B3-215ENST00000577085 ELL3Q9HB65 397 aaPredicted RBP12.76□□□□□ -0.37
SF3B3-215ENST00000577085 OR14J1Q9UGF5 321 aa12.76□□□□□ -0.37
SF3B3-215ENST00000577085 LOC107986453A0A1B0GWG9 222 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 hCG_1809904A0A1W2PP81 198 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 A0A1W2PPE2 198 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 A0A1W2PR64 198 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 A0A1W2PRD5 423 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 A0A1W2PRF3 423 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 A0A1W2PRM7 423 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 A0A1W2PRV1 198 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 POM121CA8CG34 1229 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 PRDX2P32119 198 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 SNRPGP62308 76 aaKnown RBP12.75□□□□□ -0.37
SF3B3-215ENST00000577085 CNN3Q15417 329 aaKnown RBP12.75□□□□□ -0.37
SF3B3-215ENST00000577085 METAP1DQ6UB28 335 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-215ENST00000577085 C1orf122Q6ZSJ8 110 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 ANGPTL5Q86XS5 388 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 OR5D13Q8NGL4 314 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 OR4F5Q8NH21 305 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 BORCS8Q96FH0 119 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 Q96MT0 163 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 CHIAQ9BZP6 476 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 PKIBQ9C010 78 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 ZNF222Q9UK12 451 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 MAB21L2Q9Y586 359 aa12.75□□□□□ -0.37
SF3B3-215ENST00000577085 MEIOCA2RUB1 952 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 NPFFO15130 113 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 MPZL2O60487 215 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 NOS1APO75052 506 aaPredicted RBP12.74□□□□□ -0.37
SF3B3-215ENST00000577085 CYB5AP00167 134 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 IGHV4-59P01825 116 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 ZNF20P17024 532 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 FUT6P51993 359 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms