RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 GCSAMQ8N6F7 178 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 BOLLQ8N9W6 283 aaKnown RBP7.2□□□□□ -1.26
NUP88-211ENST00000575976 C19orf18Q8NEA5 215 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 ZNF671Q8TAW3 534 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 LRRC29Q8WV35 223 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 AQP3Q92482 292 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 HPS1Q92902 700 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 TMIGD2Q96BF3 282 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 YIPF6Q96EC8 236 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 NKX3-1Q99801 234 aaPredicted RBP7.2□□□□□ -1.26
NUP88-211ENST00000575976 PIMREGQ9BSJ6 248 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 TMUB1Q9BVT8 246 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 OR51E2Q9H255 320 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 NEK6Q9HC98 313 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 TCF7L1Q9HCS4 588 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 TMEM138Q9NPI0 162 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 CKLFQ9UBR5 152 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 WIPI2Q9Y4P8 454 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 NPTNQ9Y639 398 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 CHD3Q12873 2000 aaKnown RBP7.2□□□□□ -1.26
NUP88-211ENST00000575976 PPIAL4EA0A075B759 164 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 PPIAL4DF5H284 164 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 WNT9BO14905 357 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 MAGEB3O15480 346 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 AKR7A2O43488 359 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 SPRY1O43609 319 aaPredicted RBP7.19□□□□□ -1.26
NUP88-211ENST00000575976 ANGPTL7O43827 346 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 ARL6IP5O75915 188 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 PPIAL4FP0DN26 164 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 SLC25A16P16260 332 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 ADRA2CP18825 462 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 SRMP19623 302 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 GALP22466 123 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 GADD45AP24522 165 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 CFHR2P36980 270 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 ALDH3B2P48448 385 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 POU3F4P49335 361 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 ZP1P60852 638 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 GMFBP60983 142 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 KISS1Q15726 138 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 DDI2Q5TDH0 399 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 SFRP4Q6FHJ7 346 aaPredicted RBP7.19□□□□□ -1.26
NUP88-211ENST00000575976 C22orf42Q6IC83 251 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 SLC25A26Q70HW3 274 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 PEG10Q86TG7 708 aaKnown RBP7.19□□□□□ -1.26
NUP88-211ENST00000575976 LRRTM1Q86UE6 522 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 SATL1Q86VE3 508 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 C1orf87Q8N0U7 546 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 BATF2Q8N1L9 274 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 POC1AQ8NBT0 407 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 DEFB108BQ8NET1 73 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 OR5D18Q8NGL1 313 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 OR10Z1Q8NGY1 313 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 PHYHIPQ92561 330 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 RAB1CQ92928 201 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 SEH1LQ96EE3 360 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 TIMD4Q96H15 378 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 ZNF488Q96MN9 340 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 PKIBQ9C010 78 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 NARFLQ9H6Q4 476 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 EXOSC4Q9NPD3 245 aaKnown RBP7.19□□□□□ -1.26
NUP88-211ENST00000575976 TXNL4BQ9NX01 149 aaKnown RBP7.19□□□□□ -1.26
NUP88-211ENST00000575976 STUB1Q9UNE7 303 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 SSR3Q9UNL2 185 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 PPIAL4AQ9Y536 164 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 DYSFO75923 2080 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 NBEAL1Q6ZS30 2694 aa7.19□□□□□ -1.26
NUP88-211ENST00000575976 PRRC2AP48634 2157 aaKnown RBP7.19□□□□□ -1.26
NUP88-211ENST00000575976 IGHV3OR15-7A0A075B7D8 119 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 A0A096LNT2 108 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 IGHV4-61A0A0C4DH41 118 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 IGKV1-12A0A0C4DH73 117 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 SHISA3A0PJX4 238 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 ISPDA4D126 451 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 MEGF11A6BM72 1044 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 SRRM5B3KS81 715 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 RNF223E7ERA6 249 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.18□□□□□ -1.26
NUP88-211ENST00000575976 LGALS8O00214 317 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 NOS1APO75052 506 aaPredicted RBP7.18□□□□□ -1.26
NUP88-211ENST00000575976 IGKV1D-12P01611 117 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 IGHV2-70P01814 119 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 PGA5P0DJD9 388 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 TMEM225BP0DP42 221 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 GLRA1P23415 457 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 MPZP25189 248 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 CALRP27797 417 aaKnown RBP7.18□□□□□ -1.26
NUP88-211ENST00000575976 FGF9P31371 208 aaPredicted RBP7.18□□□□□ -1.26
NUP88-211ENST00000575976 ZNF93P35789 620 aaPredicted RBP7.18□□□□□ -1.26
NUP88-211ENST00000575976 OR3A4PP47883 348 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 BTG1P62324 171 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 IL24Q13007 206 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 PDZK1IP1Q13113 114 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 ZMYND11Q15326 602 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 C1QL2Q7Z5L3 287 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 LRRC28Q86X40 367 aaPredicted RBP7.18□□□□□ -1.26
NUP88-211ENST00000575976 LYPD6Q86Y78 171 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 MKXQ8IYA7 352 aa7.18□□□□□ -1.26
NUP88-211ENST00000575976 CIARTQ8N365 385 aaPredicted RBP7.18□□□□□ -1.26
NUP88-211ENST00000575976 OR13F1Q8NGS4 319 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms