RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 CCDC22O60826 627 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 SS18L1O75177 396 aaPredicted RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 ENTPD6O75354 484 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 SLC22A5O76082 557 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 SLC25A14O95258 325 aaPredicted RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 CDK1P06493 297 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 SERPINA6P08185 405 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 NQO1P15559 274 aaKnown RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 CELP19835 753 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 GATA2P23769 480 aaPredicted RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 DTYMKP23919 212 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 ZBTB25P24278 435 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 TSPOP30536 169 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 GRPRP30550 384 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 TGM4P49221 684 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 UBE2AP49459 152 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 ZNF136P52737 540 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 CRISP3P54108 245 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 GFERP55789 205 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 RPL10AP62906 217 aaKnown RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 DAZ2Q13117 558 aaKnown RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 PNOCQ13519 176 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 C16orf72Q14CZ0 275 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 PMVKQ15126 192 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 IRF4Q15306 451 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 SHHQ15465 462 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 FCN2Q15485 313 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 IL17AQ16552 155 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 SNRNP35Q16560 246 aaKnown RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 TBC1D28Q2M2D7 210 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 SLC25A35Q3KQZ1 300 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 FBXL19-AS1Q494R0 122 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 DNAL1Q4LDG9 190 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 ACTBL2Q562R1 376 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 TMEM255AQ5JRV8 349 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 GFI1BQ5VTD9 330 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 OTPQ5XKR4 325 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 LAMTOR1Q6IAA8 161 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 CEMP1Q6PRD7 247 aaPredicted RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 CLEC19AQ6UXS0 136 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 Q6ZSR6 202 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 FAM183BPQ6ZVS7 135 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 SLC13A5Q86YT5 568 aaPredicted RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 ENTHD1Q8IYW4 607 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 BLIDQ8IZY5 108 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 ZCCHC24Q8N2G6 241 aaKnown RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 Q8N402 240 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 CDC26Q8NHZ8 85 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 C22orf15Q8WYQ4 148 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 TMEM158Q8WZ71 300 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 ESR2Q92731 530 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 RDH5Q92781 318 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 GHSRQ92847 366 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 HGDQ93099 445 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 PTX4Q96A99 478 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 ANKRD9Q96BM1 317 aaPredicted RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 SMIM19Q96E16 107 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 OR10C1Q96KK4 312 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 CEP170P1Q96L14 293 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 BIRC8Q96P09 236 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 RBP7Q96R05 134 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 OR4K3Q96R72 315 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 TAAR1Q96RJ0 339 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 FAAP24Q9BTP7 215 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 SAMD10Q9BYL1 202 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 SLC19A3Q9BZV2 496 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 ARL6Q9H0F7 186 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 MFSD1Q9H3U5 465 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 NANOGQ9H9S0 305 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 DAZ3Q9NR90 486 aaKnown RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 PLSCR3Q9NRY6 295 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 IL17CQ9P0M4 197 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 PRO0628Q9UI54 55 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 TBL2Q9Y4P3 447 aaKnown RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 MTCH2Q9Y6C9 303 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 ENPP4Q9Y6X5 453 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 HCFC1P51610 2035 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 MTCL1Q9Y4B5 1905 aaKnown RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 VWA8A3KMH1 1905 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 IGLV1-50A0A075B6I6 118 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 IGHV3-66A0A0C4DH42 116 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 DAPL1A0PJW8 107 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 A6NDX4 124 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 I3L4J1 428 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 M0R036 132 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 UPK2O00526 184 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 GPR171O14626 319 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 HDAC3O15379 428 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 TRAPPC3O43617 180 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 SSNA1O43805 119 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 SPAG7O75391 227 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 CA11O75493 328 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 REM1O75628 298 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 SERPINB7O75635 380 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 DHRS3O75911 302 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 CTDNEP1O95476 244 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 IFNA5P01569 189 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 MT-ND4P03905 459 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 MRPL3P09001 348 aaKnown RBP1.47□□□□□ -2.17
CHD3-217ENST00000574022 SLC2A1P11166 492 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms