RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 ATG12O94817 140 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 RFPL3SP0C7P2 107 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 CRYGSP22914 178 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 RBMXP38159 391 aaKnown RBP9.78□□□□□ -0.84
RPAIN-212ENST00000573126 ZNF169Q14929 603 aaPredicted RBP9.78□□□□□ -0.84
RPAIN-212ENST00000573126 RSU1Q15404 277 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 IAH1Q2TAA2 248 aaPredicted RBP9.78□□□□□ -0.84
RPAIN-212ENST00000573126 TMEM88Q6PEY1 159 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 RHBDD1Q8TEB9 315 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 TOMM40LQ969M1 308 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 LIME1Q9H400 295 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 ZNF705EA8MWA4 302 aaPredicted RBP9.77□□□□□ -0.84
RPAIN-212ENST00000573126 SYNGR3O43761 229 aa9.77□□□□□ -0.84
RPAIN-212ENST00000573126 IFNA2P01563 188 aa9.77□□□□□ -0.84
RPAIN-212ENST00000573126 APOC1P02654 83 aa9.77□□□□□ -0.84
RPAIN-212ENST00000573126 ZNF32P17041 273 aa9.77□□□□□ -0.84
RPAIN-212ENST00000573126 FOLR3P41439 243 aa9.77□□□□□ -0.84
RPAIN-212ENST00000573126 NAAAQ02083 359 aa9.77□□□□□ -0.84
RPAIN-212ENST00000573126 GUCA2BQ16661 112 aa9.77□□□□□ -0.84
RPAIN-212ENST00000573126 AQP10Q96PS8 301 aa9.77□□□□□ -0.84
RPAIN-212ENST00000573126 FRYQ5TBA9 3013 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 RAB19A4D1S5 217 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 CXCL13O43927 109 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 F12P00748 615 aaPredicted RBP9.77□□□□□ -0.85
RPAIN-212ENST00000573126 FAM157CP0CG43 387 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 OR5H8P0DN80 308 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 GLI4P10075 376 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 CTRB1P17538 263 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 RCC1P18754 421 aaPredicted RBP9.77□□□□□ -0.85
RPAIN-212ENST00000573126 OTX2P32243 289 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 HTR5AP47898 357 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 CARD18P57730 90 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 RAC3P60763 192 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 RBM39Q14498 530 aaKnown RBP9.77□□□□□ -0.85
RPAIN-212ENST00000573126 PDCD1Q15116 288 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 PDSS1Q5T2R2 415 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 RPL7L1Q6DKI1 246 aaKnown RBP9.77□□□□□ -0.85
RPAIN-212ENST00000573126 CTRB2Q6GPI1 263 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 OR2A2Q6IF42 318 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 PUSL1Q8N0Z8 303 aaKnown RBP9.77□□□□□ -0.85
RPAIN-212ENST00000573126 BATF2Q8N1L9 274 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 GPR137CQ8N3F9 429 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 HRH4Q9H3N8 390 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 TMEM100Q9NV29 134 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 AK3Q9UIJ7 227 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 ANXA10Q9UJ72 324 aa9.77□□□□□ -0.85
RPAIN-212ENST00000573126 NTN3O00634 580 aaPredicted RBP9.76□□□□□ -0.85
RPAIN-212ENST00000573126 TRAPPC6AO75865 159 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 IGHV3-9P01782 118 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 PET100P0DJ07 73 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 LYL1P12980 280 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 RGS19P49795 217 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 SUCLG1P53597 346 aaKnown RBP9.76□□□□□ -0.85
RPAIN-212ENST00000573126 B3GALT5-AS1P59052 145 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 ZFP36L1Q07352 338 aaKnown RBP9.76□□□□□ -0.85
RPAIN-212ENST00000573126 IL15RAQ13261 267 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 EIF3IQ13347 325 aaKnown RBP9.76□□□□□ -0.85
RPAIN-212ENST00000573126 RAB35Q15286 201 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 PIGYQ3MUY2 71 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 SP6Q3SY56 376 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 UQCC3Q6UW78 93 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 OR4A4PQ8NGN8 299 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 OR1F12Q8NHA8 337 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 ARL11Q969Q4 196 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 C10orf35Q96D05 121 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 SLC5A7Q9GZV3 580 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 METTL9Q9H1A3 318 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 C1orf123Q9NWV4 160 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 ZNF850A8MQ14 1090 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 GEMIN2O14893 280 aaKnown RBP9.76□□□□□ -0.85
RPAIN-212ENST00000573126 TSPAN9O75954 239 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 P04436 131 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 CD79AP11912 226 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 ARL6IP1Q15041 203 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 SURF2Q15527 256 aaPredicted RBP9.76□□□□□ -0.85
RPAIN-212ENST00000573126 WIPI1Q5MNZ9 446 aaPredicted RBP9.76□□□□□ -0.85
RPAIN-212ENST00000573126 PLXDC2Q6UX71 529 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 Q6ZSR3 168 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 GGNQ86UU5 652 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 SGPP2Q8IWX5 399 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 FGFBP3Q8TAT2 258 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 SPSB1Q96BD6 273 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 INTS12Q96CB8 462 aaKnown RBP9.76□□□□□ -0.85
RPAIN-212ENST00000573126 BORCS8Q96FH0 119 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 SULT4A1Q9BR01 284 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 TMEM38BQ9NVV0 291 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 PADI1Q9ULC6 663 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 FAM186AA6NE01 2351 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 GJE1A6NN92 205 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 F8W036 122 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 ZNHIT1O43257 154 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 LRP3O75074 770 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 SCGB1D2O95969 90 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 ZNF708P17019 499 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 RBP2P50120 134 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 FXYD4P59646 89 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 BLOC1S1P78537 153 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 SPEM2Q0P670 501 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 Q0VFX4 171 aa9.76□□□□□ -0.85
RPAIN-212ENST00000573126 TSPO2Q5TGU0 170 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms