RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 TPRKBQ9Y3C4 175 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 A0A1B0GW55 424 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 OGG1O15527 345 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 ADAM20O43506 726 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 MT-ND2P03891 347 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 TFF1P04155 84 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 WNT2P09544 360 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 DUX4L2P0CJ85 424 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 DUX4L3P0CJ86 424 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 DUX4L4P0CJ87 422 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 DUX4L5P0CJ88 424 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 DUX4L6P0CJ89 424 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 DUX4L7P0CJ90 424 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 AZGP1P25311 298 aaKnown RBP13.18□□□□□ -0.3
CHD3-215ENST00000572750 CFHR2P36980 270 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 PITPNBP48739 271 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 KCNJ8Q15842 424 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 MICBQ29980 383 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 CR1LQ2VPA4 569 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 DMKNQ6E0U4 476 aaPredicted RBP13.18□□□□□ -0.3
CHD3-215ENST00000572750 DUX4L9Q6RFH8 374 aaPredicted RBP13.18□□□□□ -0.3
CHD3-215ENST00000572750 UTS2BQ765I0 119 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 NLRC3Q7RTR2 1065 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 GHSRQ92847 366 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 BORCS8Q96FH0 119 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 NEIL1Q96FI4 390 aaPredicted RBP13.18□□□□□ -0.3
CHD3-215ENST00000572750 PGLYRP3Q96LB9 341 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 OR5M11Q96RB7 305 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 SSBP3Q9BWW4 388 aaPredicted RBP13.18□□□□□ -0.3
CHD3-215ENST00000572750 CDCA4Q9BXL8 241 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 DUSP21Q9H596 190 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 SMURF1Q9HCE7 757 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 SNTG1Q9NSN8 517 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 DNAJB11Q9UBS4 358 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 DUX4Q9UBX2 424 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 LRCH1Q9Y2L9 728 aa13.18□□□□□ -0.3
CHD3-215ENST00000572750 TRAV20A0A0B4J274 112 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 A8MXK9 166 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 RGS10O43665 173 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 FOXH1O75593 365 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 OCM2P0CE71 109 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 OCMP0CE72 109 aaPredicted RBP13.17□□□□□ -0.3
CHD3-215ENST00000572750 ATF1P18846 271 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 GLRA1P23415 457 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 FUT6P51993 359 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 TAS2R43P59537 309 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 GNB2P62879 340 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 IRF3Q14653 427 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 FAM120AOSQ5T036 256 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 RNLSQ5VYX0 342 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 STUMQ69YW2 141 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 ASPHD2Q6ICH7 369 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 OR5T2Q8NGG2 359 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 GPR148Q8TDV2 347 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 OPALINQ96PE5 141 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 SPACA5Q96QH8 159 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 CCDC90BQ9GZT6 254 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 Q9H521 79 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 ZNF281Q9Y2X9 895 aa13.17□□□□□ -0.3
CHD3-215ENST00000572750 LSM2Q9Y333 95 aaKnown RBP13.17□□□□□ -0.3
CHD3-215ENST00000572750 TMPRSS2O15393 492 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 RPSAP08865 295 aaKnown RBP13.16□□□□□ -0.3
CHD3-215ENST00000572750 PGA5P0DJD9 388 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 MUC1P15941 1255 aaPredicted RBP13.16□□□□□ -0.3
CHD3-215ENST00000572750 CELP19835 753 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 MPZP25189 248 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 RBP2P50120 134 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 RBM48Q5RL73 367 aaKnown RBP13.16□□□□□ -0.3
CHD3-215ENST00000572750 RNF144BQ7Z419 303 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 PARP16Q8N5Y8 322 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 FAM216BQ8N7L0 139 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 POC1AQ8NBT0 407 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 ZNF671Q8TAW3 534 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 TMEM106AQ96A25 262 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 SLAMF9Q96A28 289 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 RFT1Q96AA3 541 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 SPSB1Q96BD6 273 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 CCL13Q99616 98 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 PKIBQ9C010 78 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 ZCCHC4Q9H5U6 513 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 MMP26Q9NRE1 261 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 TMEM160Q9NX00 188 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 TAS2R4Q9NYW5 299 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 NLKQ9UBE8 527 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 CLN8Q9UBY8 286 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 OR5V1Q9UGF6 321 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 BLOC1S6Q9UL45 172 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 POLDIP2Q9Y2S7 368 aa13.16□□□□□ -0.3
CHD3-215ENST00000572750 WNK2Q9Y3S1 2297 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 A0A0G2JMP0 313 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 A0A0X1KG70 313 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 TNFRSF13BO14836 293 aaPredicted RBP13.15□□□□□ -0.3
CHD3-215ENST00000572750 SULT1B1O43704 296 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 FCN3O75636 299 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 INMTO95050 263 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 HCKP08631 526 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 SELLP14151 372 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 PRKACBP22694 351 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 EEF1B2P24534 225 aaKnown RBP13.15□□□□□ -0.3
CHD3-215ENST00000572750 POU3F4P49335 361 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms