RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 UCHL1P09936 223 aa18.5■□□□□ 0.55
RAB40B-207ENST00000572603 TGFBR2P37173 567 aa18.5■□□□□ 0.55
RAB40B-207ENST00000572603 ATP1B3P54709 279 aa18.5■□□□□ 0.55
RAB40B-207ENST00000572603 LOXL1Q08397 574 aaPredicted RBP18.5■□□□□ 0.55
RAB40B-207ENST00000572603 CD200R1LQ6Q8B3 271 aa18.5■□□□□ 0.55
RAB40B-207ENST00000572603 CLDND2Q8NHS1 167 aa18.5■□□□□ 0.55
RAB40B-207ENST00000572603 FOXJ3Q9UPW0 622 aa18.5■□□□□ 0.55
RAB40B-207ENST00000572603 AKR7A2O43488 359 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 PGA5P0DJD9 388 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 JUNBP17275 347 aaPredicted RBP18.49■□□□□ 0.55
RAB40B-207ENST00000572603 USF1P22415 310 aaPredicted RBP18.49■□□□□ 0.55
RAB40B-207ENST00000572603 MTCP1P56278 107 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 ZP1P60852 638 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 PPP3R1P63098 170 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 IL24Q13007 206 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 TEX36Q5VZQ5 186 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 CEACAM19Q7Z692 300 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 POC1AQ8NBT0 407 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 MAPK1IP1LQ8NDC0 245 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 OR52N4Q8NGI2 321 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 RFT1Q96AA3 541 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 ZNF488Q96MN9 340 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 TMUB1Q9BVT8 246 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 NARFLQ9H6Q4 476 aa18.49■□□□□ 0.55
RAB40B-207ENST00000572603 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.49■□□□□ 0.55
RAB40B-207ENST00000572603 PPIAL4EA0A075B759 164 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 PPIAL4DF5H284 164 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 LGALS8O00214 317 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 ALDOBP05062 364 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 HCKP08631 526 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 PPIAL4FP0DN26 164 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 BDKRB2P30411 391 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 IL2RGP31785 369 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 MDH2P40926 338 aaKnown RBP18.48■□□□□ 0.55
RAB40B-207ENST00000572603 KISS1Q15726 138 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 ZNF404Q494X3 552 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 TMEM155Q4W5P6 130 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 PEG10Q86TG7 708 aaKnown RBP18.48■□□□□ 0.55
RAB40B-207ENST00000572603 LRRC28Q86X40 367 aaPredicted RBP18.48■□□□□ 0.55
RAB40B-207ENST00000572603 BOLLQ8N9W6 283 aaKnown RBP18.48■□□□□ 0.55
RAB40B-207ENST00000572603 SEH1LQ96EE3 360 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 NKX3-1Q99801 234 aaPredicted RBP18.48■□□□□ 0.55
RAB40B-207ENST00000572603 NRIP2Q9BQI9 281 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 WDR13Q9H1Z4 485 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 TMEM165Q9HC07 324 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 TMEM138Q9NPI0 162 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 POLDIP2Q9Y2S7 368 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 PPIAL4AQ9Y536 164 aa18.48■□□□□ 0.55
RAB40B-207ENST00000572603 IGKV1-12A0A0C4DH73 117 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 ISPDA4D126 451 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 OOEPA6NGQ2 149 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 NOS1APO75052 506 aaPredicted RBP18.47■□□□□ 0.55
RAB40B-207ENST00000572603 PLATP00750 562 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 IGKV1D-12P01611 117 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 OCMP0CE72 109 aaPredicted RBP18.47■□□□□ 0.55
RAB40B-207ENST00000572603 ADRA2CP18825 462 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 POU3F4P49335 361 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 ERVK11-1P61568 191 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 LMO4P61968 165 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 DDI2Q5TDH0 399 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 SLC25A26Q70HW3 274 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 LRRTM1Q86UE6 522 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 LYPD6Q86Y78 171 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 OR5D18Q8NGL1 313 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 NEK6Q9HC98 313 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 MTCH1Q9NZJ7 389 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 CKLFQ9UBR5 152 aa18.47■□□□□ 0.55
RAB40B-207ENST00000572603 TRDV1A0A1B0GX56 115 aa18.46■□□□□ 0.55
RAB40B-207ENST00000572603 ACAA1P09110 424 aaPredicted RBP18.46■□□□□ 0.55
RAB40B-207ENST00000572603 PDZK1IP1Q13113 114 aa18.46■□□□□ 0.55
RAB40B-207ENST00000572603 HSD17B12Q53GQ0 312 aa18.46■□□□□ 0.55
RAB40B-207ENST00000572603 SFRP4Q6FHJ7 346 aaPredicted RBP18.46■□□□□ 0.55
RAB40B-207ENST00000572603 FAM90A1Q86YD7 464 aa18.46■□□□□ 0.55
RAB40B-207ENST00000572603 MUC20Q8N307 709 aaPredicted RBP18.46■□□□□ 0.55
RAB40B-207ENST00000572603 ZNF671Q8TAW3 534 aa18.46■□□□□ 0.55
RAB40B-207ENST00000572603 PHYHIPQ92561 330 aa18.46■□□□□ 0.55
RAB40B-207ENST00000572603 SLAMF9Q96A28 289 aa18.46■□□□□ 0.55
RAB40B-207ENST00000572603 TMEM246Q9BRR3 403 aa18.46■□□□□ 0.55
RAB40B-207ENST00000572603 HES4Q9HCC6 221 aa18.46■□□□□ 0.55
RAB40B-207ENST00000572603 VCX3AQ9NNX9 186 aa18.46■□□□□ 0.55
RAB40B-207ENST00000572603 TLN2Q9Y4G6 2542 aa18.46■□□□□ 0.55
RAB40B-207ENST00000572603 ABCA1O95477 2261 aa18.46■□□□□ 0.54
RAB40B-207ENST00000572603 IGHV3OR15-7A0A075B7D8 119 aa18.45■□□□□ 0.54
RAB40B-207ENST00000572603 CEACAM18A8MTB9 384 aa18.45■□□□□ 0.54
RAB40B-207ENST00000572603 F5H0A9 414 aaPredicted RBP18.45■□□□□ 0.54
RAB40B-207ENST00000572603 F8VVB4 439 aa18.45■□□□□ 0.54
RAB40B-207ENST00000572603 F8VWA3 439 aa18.45■□□□□ 0.54
RAB40B-207ENST00000572603 TNFRSF13BO14836 293 aaPredicted RBP18.45■□□□□ 0.54
RAB40B-207ENST00000572603 SPRY1O43609 319 aaPredicted RBP18.45■□□□□ 0.54
RAB40B-207ENST00000572603 IGHV2-5P01817 119 aa18.45■□□□□ 0.54
RAB40B-207ENST00000572603 GALP22466 123 aa18.45■□□□□ 0.54
RAB40B-207ENST00000572603 GMFBP60983 142 aa18.45■□□□□ 0.54
RAB40B-207ENST00000572603 BATF2Q8N1L9 274 aa18.45■□□□□ 0.54
RAB40B-207ENST00000572603 DEFB108BQ8NET1 73 aa18.45■□□□□ 0.54
RAB40B-207ENST00000572603 GAL3ST1Q99999 423 aa18.45■□□□□ 0.54
RAB40B-207ENST00000572603 MRPS26Q9BYN8 205 aaKnown RBP18.45■□□□□ 0.54
RAB40B-207ENST00000572603 SMAD7O15105 426 aaKnown RBP18.44■□□□□ 0.54
RAB40B-207ENST00000572603 ANGPTL7O43827 346 aa18.44■□□□□ 0.54
RAB40B-207ENST00000572603 MAS1P04201 325 aa18.44■□□□□ 0.54
RAB40B-207ENST00000572603 GLRA1P23415 457 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms