RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 YIPF6Q96EC8 236 aa5.55□□□□□ -1.52
CHD3-213ENST00000571249 SLC41A3Q96GZ6 507 aa5.55□□□□□ -1.52
CHD3-213ENST00000571249 TXNDC15Q96J42 360 aa5.55□□□□□ -1.52
CHD3-213ENST00000571249 TM2D3Q9BRN9 247 aa5.55□□□□□ -1.52
CHD3-213ENST00000571249 ZNF426Q9BUY5 554 aa5.55□□□□□ -1.52
CHD3-213ENST00000571249 SLC25A32Q9H2D1 315 aa5.55□□□□□ -1.52
CHD3-213ENST00000571249 SIRT7Q9NRC8 400 aa5.55□□□□□ -1.52
CHD3-213ENST00000571249 IMPAD1Q9NX62 359 aa5.55□□□□□ -1.52
CHD3-213ENST00000571249 IL20Q9NYY1 176 aa5.55□□□□□ -1.52
CHD3-213ENST00000571249 CTSZQ9UBR2 303 aa5.55□□□□□ -1.52
CHD3-213ENST00000571249 ENPP5Q9UJA9 477 aa5.55□□□□□ -1.52
CHD3-213ENST00000571249 A0A0B4J2E0 115 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 A0A1B0GVI7 797 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 A0A1B0GVY2 172 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 A0A1B0GX12 115 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 C5orf49A4QMS7 147 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 CCDC160A6NGH7 325 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 LRRC30A6NM36 301 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 ZNF785A8K8V0 405 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 FTCDNL1E5RQL4 147 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 M0QYG6 137 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 SYNGR1O43759 233 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 NPIPB7O75200 414 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 GABARAPO95166 117 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 AHSA1O95433 338 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 FSTL3O95633 263 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 IGF2P01344 180 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 HLA-DOBP13765 273 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 AHCYP23526 432 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 STOMP27105 288 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 RBM34P42696 430 aaKnown RBP5.54□□□□□ -1.52
CHD3-213ENST00000571249 RPS5P46782 204 aaKnown RBP5.54□□□□□ -1.52
CHD3-213ENST00000571249 HSF2Q03933 536 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 PRKCDQ05655 676 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 KLRD1Q13241 179 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 IKZF1Q13422 519 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 GINS1Q14691 196 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 CTF1Q16619 201 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 SLC36A2Q495M3 483 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 PLA1AQ53H76 456 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 MRPL2Q5T653 305 aaKnown RBP5.54□□□□□ -1.52
CHD3-213ENST00000571249 GPR107Q5VW38 600 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 TMEM200BQ69YZ2 307 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 DGAT2L7PQ6IED9 249 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 UNQ6126/PRO20091Q6UXV3 157 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 PTCHD4Q6ZW05 846 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 RFPL4BQ6ZWI9 263 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 TMPRSS11FQ6ZWK6 438 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 BTN2A1Q7KYR7 527 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 SLC16A14Q7RTX9 510 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 IGFN1Q86VF2 1251 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 NKAIN4Q8IVV8 208 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 UEVLDQ8IX04 471 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 ZNF440Q8IYI8 595 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 CADM2Q8N3J6 435 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 ARL6IP6Q8N6S5 226 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 OR51G2Q8NGK0 314 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 ABHD5Q8WTS1 349 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 COPS4Q9BT78 406 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 TINAGL1Q9GZM7 467 aaPredicted RBP5.54□□□□□ -1.52
CHD3-213ENST00000571249 NANSQ9NR45 359 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 C20orf141Q9NUB4 165 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 CLN6Q9NWW5 311 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 KPTNQ9Y664 436 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 HMCN2Q8NDA2 5059 aa5.54□□□□□ -1.52
CHD3-213ENST00000571249 LRP1BQ9NZR2 4599 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 CPSF4LA6NMK7 179 aaKnown RBP5.53□□□□□ -1.52
CHD3-213ENST00000571249 ZNF726A6NNF4 738 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 UBE2CO00762 179 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 SLC22A1O15245 554 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 CHP2O43745 196 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 FARS2O95363 451 aaKnown RBP5.53□□□□□ -1.52
CHD3-213ENST00000571249 PRG2P13727 222 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 GRK5P34947 590 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 PMELP40967 661 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 VDAC2P45880 294 aaPredicted RBP5.53□□□□□ -1.52
CHD3-213ENST00000571249 MAP2K4P45985 399 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 HTR5AP47898 357 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 CSNK1A1P48729 337 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 ST3GAL4Q11206 333 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 DYNC1I2Q13409 638 aaKnown RBP5.53□□□□□ -1.52
CHD3-213ENST00000571249 OR1Q1Q15612 314 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 LRRC75BQ2VPJ9 315 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 TMEM236Q5W0B7 351 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 RPL13AP3Q6NVV1 102 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 METAP1DQ6UB28 335 aaPredicted RBP5.53□□□□□ -1.52
CHD3-213ENST00000571249 ZNF730Q6ZMV8 503 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 WDR88Q6ZMY6 472 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 AHSA2Q719I0 299 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 DPPA2Q7Z7J5 298 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 NRMQ8IXM6 262 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 C1orf87Q8N0U7 546 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 OR8D4Q8NGM9 314 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 TMEM163Q8TC26 289 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 AJUBAQ96IF1 538 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 POM121L2Q96KW2 1035 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 ZNF649Q9BS31 505 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 PTDSS2Q9BVG9 487 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 FUNDC2Q9BWH2 189 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 PRRG3Q9BZD7 231 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms