RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 PLCXD2Q0VAA5 305 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 KHDC3LQ587J8 217 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 OR10S1Q8NGN2 331 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 GPR119Q8TDV5 335 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 RELTQ969Z4 430 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 TGM7Q96PF1 710 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 SSX3Q99909 188 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 GPR84Q9NQS5 396 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 POLR1DQ9Y2S0 133 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 FOXI3A8MTJ6 420 aaPredicted RBP13.54□□□□□ -0.24
SMG6-207ENST00000570756 TMEM150CB9EJG8 249 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 CXCL1P09341 107 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 HSF1Q00613 529 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 RAB30Q15771 203 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 H1FNTQ75WM6 255 aaPredicted RBP13.54□□□□□ -0.24
SMG6-207ENST00000570756 M1APQ8TC57 530 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 GPR61Q9BZJ8 451 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 C8orf33Q9H7E9 229 aaPredicted RBP13.54□□□□□ -0.24
SMG6-207ENST00000570756 DECR2Q9NUI1 292 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 FAM86C1Q9NVL1 165 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 TCFL5Q9UL49 500 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 CYB5BO43169 146 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 XRCC2O43543 280 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 TSPAN2O60636 221 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 TNFP01375 233 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 SOD3P08294 240 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 DLK1P80370 383 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 EIF3IQ13347 325 aaKnown RBP13.54□□□□□ -0.24
SMG6-207ENST00000570756 ZNF266Q14584 549 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 SLC22A25Q6T423 547 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 OR2AJ1Q8NGZ0 328 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 GPBAR1Q8TDU6 330 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 FAM71F1Q96KD3 344 aaPredicted RBP13.54□□□□□ -0.24
SMG6-207ENST00000570756 NIPSNAP3BQ9BS92 247 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 IGFLR1Q9H665 355 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 FBRSQ9HAH7 460 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 KIAA1456Q9P272 454 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 ZDHHC8Q9ULC8 765 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 MUC3AQ02505 3323 aa13.54□□□□□ -0.24
SMG6-207ENST00000570756 CDC14CA4D256 554 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 ZNF724A8MTY0 619 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 ST8SIA3O43173 380 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 TGOLN2O43493 480 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 DIRAS3O95661 229 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 IGKV3-11P04433 115 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 IL11P20809 199 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 DUSP1P28562 367 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 KIR2DL1P43626 348 aaPredicted RBP13.53□□□□□ -0.24
SMG6-207ENST00000570756 PIGPP57054 158 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 RAB4BP61018 213 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 YPEL5P62699 121 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 HHEXQ03014 270 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 ZNF343Q6P1L6 599 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 BEND4Q6ZU67 534 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 DOK3Q7L591 496 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 SFTPA2Q8IWL1 248 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 OR8B12Q8NGG6 310 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 TMEM234Q8WY98 164 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 TVP23CQ96ET8 276 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 TCEAL2Q9H3H9 227 aaPredicted RBP13.53□□□□□ -0.24
SMG6-207ENST00000570756 ZNF576Q9H609 170 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 MED29Q9NX70 200 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 H0YIG0 161 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 HSD17B6O14756 317 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 NTSR1P30989 418 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 ALDH3B1P43353 468 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 TLE3Q04726 772 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 ABCA11PQ4W5N1 156 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 OR2T2Q6IF00 324 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 FBXW12Q6X9E4 464 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 ZNF429Q86V71 674 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 CYYR1Q96J86 154 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 SUCNR1Q9BXA5 334 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 NAA60Q9H7X0 242 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 PISDQ9UG56 409 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 MMACHCQ9Y4U1 282 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 URGCP-MRPS24S4R325 110 aa13.53□□□□□ -0.24
SMG6-207ENST00000570756 PHF3Q92576 2039 aaKnown RBP13.53□□□□□ -0.24
SMG6-207ENST00000570756 MED19A0JLT2 244 aaPredicted RBP13.52□□□□□ -0.24
SMG6-207ENST00000570756 TERTO14746 1132 aaKnown RBP13.52□□□□□ -0.24
SMG6-207ENST00000570756 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.24
SMG6-207ENST00000570756 CCL1P22362 96 aa13.52□□□□□ -0.24
SMG6-207ENST00000570756 GLIPR1P48060 266 aa13.52□□□□□ -0.24
SMG6-207ENST00000570756 ERVFRD-1P60508 538 aa13.52□□□□□ -0.24
SMG6-207ENST00000570756 GNMTQ14749 295 aa13.52□□□□□ -0.24
SMG6-207ENST00000570756 LRTM2Q8N967 370 aa13.52□□□□□ -0.24
SMG6-207ENST00000570756 OR2G3Q8NGZ4 309 aa13.52□□□□□ -0.24
SMG6-207ENST00000570756 OR5R1Q8NH85 324 aa13.52□□□□□ -0.24
SMG6-207ENST00000570756 ZNF721Q8TF20 911 aa13.52□□□□□ -0.24
SMG6-207ENST00000570756 SSC4DQ8WTU2 575 aa13.52□□□□□ -0.24
SMG6-207ENST00000570756 LURAP1Q96LR2 239 aa13.52□□□□□ -0.24
SMG6-207ENST00000570756 JSRP1Q96MG2 331 aaPredicted RBP13.52□□□□□ -0.24
SMG6-207ENST00000570756 C2orf88Q9BSF0 95 aa13.52□□□□□ -0.24
SMG6-207ENST00000570756 TGIF2-C20orf24A0A0A6YYL0 155 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 FAM230AA0A1W2PPH8 454 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 TRGC2P03986 189 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 SRP19P09132 144 aaKnown RBP13.52□□□□□ -0.25
SMG6-207ENST00000570756 FABP4P15090 132 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 TNFRSF4P43489 277 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 CEBPGP53567 150 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms